Talpa occidentalis (Iberian mole): 119252328
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Entry
119252328 CDS
T07495
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03320
PPAR signaling pathway
tod04659
Th17 cell differentiation
tod04919
Thyroid hormone signaling pathway
tod04920
Adipocytokine signaling pathway
tod04928
Parathyroid hormone synthesis, secretion and action
tod05200
Pathways in cancer
tod05202
Transcriptional misregulation in cancer
tod05207
Chemical carcinogenesis - receptor activation
tod05216
Thyroid cancer
tod05222
Small cell lung cancer
tod05223
Non-small cell lung cancer
tod05226
Gastric cancer
tod05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
119252328 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
119252328 (RXRB)
03320 PPAR signaling pathway
119252328 (RXRB)
04919 Thyroid hormone signaling pathway
119252328 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
119252328 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119252328 (RXRB)
05202 Transcriptional misregulation in cancer
119252328 (RXRB)
05207 Chemical carcinogenesis - receptor activation
119252328 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
119252328 (RXRB)
05216 Thyroid cancer
119252328 (RXRB)
05222 Small cell lung cancer
119252328 (RXRB)
05223 Non-small cell lung cancer
119252328 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
119252328 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tod03000
]
119252328 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tod03310
]
119252328 (RXRB)
Transcription factors [BR:
tod03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
119252328 (RXRB)
Nuclear receptors [BR:
tod03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
119252328 (RXRB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
119252328
NCBI-ProteinID:
XP_037375399
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MSWASRPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAAAAAGE
QQTPELEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAPPPSPGPPLPPSAAPSLGGSGA
PPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSVPPED
VKPPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLT
YSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEE
MPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIP
HFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFD
RSLSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETY
CKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcttctcgcccgcccttcctcccccagcggcatgccgcggggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcagcagcggcggcggcggcggcagcagcggcggcagccggagaa
caacaaaccccggagctggagccgggggaggctggacgggacgggatgggcgacagcggg
cgggactcccgaagcccagatagttcctcccctaaccccctcccccagggtgcccctccc
ccttctcctgggccacccctccccccttcagcagccccatcccttggaggctctggggcc
ccacctccacccccgatgccaccacccccactgggttcccccttccctgtcatcagctct
tccatggggtcccctggcctgccccctccagctccccctggattctccgggcctgtcagc
agtccccagattaattcaacagtgtcgctccctgggggtggttctgtcccccctgaagat
gtgaagccaccggtcttaggggtccggggcctgcactgtccaccccctcccggtggccct
ggggctggcaaacgactttgtgcaatctgcggggaccgaagctcaggcaaacactatggg
gtttacagctgtgagggctgcaaaggcttctttaagcgcaccatccggaaagatctgacc
tactcgtgccgcgacaacaaggactgcactgtggacaagcgccagcggaaccgctgtcag
tactgccgctatcagaagtgcctggccaccggcatgaagagggaggcggtacaggaggag
cgtcagcggggaaaggacaaggatggggatggggagggggctgggggagcccccgaggag
atgcctgtggacaggatcctggaggcagagcttgcggtggaacagaagagtgaccagggc
gttgagggtcctgggggaaccgggggtagcggcagcagcccaaatgaccctgtgactaac
atctgtcaggcagctgacaaacagctgttcacgcttgttgagtgggcgaagaggatccca
cacttttcctccttgcctctggatgaccaggtcatattgctgcgggcaggctggaacgag
ctcctcattgcttctttctcccaccgatccattgatgtccgagatggcatcctcctcgct
acaggtcttcatgtgcaccgcaactcagcccattctgcaggcgtgggagccatctttgat
cggtccctctccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggac
aagacagagcttggctgcctgagggcaatcattctgttcaatccagatgccaagggcctc
tccaaccccagtgaagtggaggtgctgcgggagaaagtgtatgcgtcactggagacctat
tgcaaacagaagtaccctgagcagcagggacggtttgccaagctgctgctacgtcttcct
gccctcaggtccatcggccttaagtgtctagagcatctgtttttcttcaagctcattggc
gacacccccattgacaccttcctcatggaaatgcttgaggctccccaccagctggcctga
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