KEGG   Talpa occidentalis (Iberian mole): 119252775
Entry
119252775         CDS       T07495                                 
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
tod  Talpa occidentalis (Iberian mole)
Pathway
tod03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tod00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119252775 (CDC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tod03041]
    119252775 (CDC40)
Spliceosome [BR:tod03041]
 Complex C
  Other components
   Step II factors
    119252775 (CDC40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_NWD2_C WD_LRWD1 WDR54 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 119252775
NCBI-ProteinID: XP_037376115
LinkDB
Position
Unknown
AA seq 579 aa
MSAAIASLAASYGSGSGSESDSDSEGGRCPLPAADSLMHLTKSPSAKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEDEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgtcggctgcgattgcatctctggctgcttcgtacggttcgggttcagggtccgaatcg
gactcggacagtgagggcggacggtgtccgctgccagccgccgactccctcatgcatttg
actaaatcgccttcagccaaaccctctctggccgtggcggtggactcggctccggaggtg
gcagttaaggaagatttggagactggagttcaccttgaccctgctgttaaagaagttcag
tataaccctacatacgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcaaatggctgcacctagaaatatgctttcgggatatgctgaaccagcccatatc
aatgattttatgtttgaacagcaaagaagaacttttgctacatatggttatgcattagac
ccttcattagataatcaccaagtgtctactaaatatattggttctgtagaagaagctgaa
aaaaatcaaggtttaactgtgtttgaaactggtcagaagaaaatagaaaagaggaaaaag
ttcaaagaaaatgatgcatctaatattgatggtttcttgggaccatgggcaaaatatgtg
gatgaaaaagatgtagccaaaccttcagaagaagaacagaaagaactagatgaaatcaca
gcaaagaggcagaaaaaaggcaaacaagaagatgagaaacctggggaagaaaagacaatc
ttacatgttaaagaaatgtatgactatcagggcaggtcctatcttcacatacctcaggat
gttggtgttaatctgcggtcaactgtgccacctgagaagtgttatcttcccaaaaaacaa
attcatgtgtggtcagggcacacaaagggcgtcagtgcagtcagattgtttcctctctct
ggccatttattgctgtcttgttccatggactgtaaaattaagttatgggaagtttatgga
gacaggcgctgtctacgaacatttattggtcatggtaaagctgttagggacatctgcttt
aataccgcaggaacacagttcctcagtgcagcttatgacaggtatcttaagctctgggac
accgagacaggacaatgtatatcaagatttacaaaccgaaaagtaccctattgtgtcaaa
tttaatcctgatgaagataagcaaaatctctttgtggctgggatgtctgataaaaagatt
gtgcaatgggacattcgaagtggagaaattgtacaggaatatgatcggcatttgggagct
gtcaacaccattgtttttgttgatgagaacaggagatttgtgagcacatctgatgataag
agcctaagagtttgggaatgggatatccctgtggattttaagtacatagcagaacccagt
atgcactcaatgcctgcagtgactttgtctccaaatgggaaatggctagcatgccaatca
atggacaaccaaatcttaatttttggagcacagaacagattcagattaaataagaaaaaa
atctttaagggccatatggtagcaggctatgcttgtcaggtggacttttcaccagacatg
agctatgtgatttcaggagatggaaatggaaaattaaacatctgggactggaagaccaca
aaactctacagtcgatttaaagctcatgataaagtgtgtatcggtgcagtgtggcatcca
catgaaacatctaaagtgataacatgtggttgggatggtctcattaaattgtgggattaa

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