Talpa occidentalis (Iberian mole): 119252997
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Entry
119252997 CDS
T07495
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tod03021
]
119252997 (SCAF8)
03041 Spliceosome [BR:
tod03041
]
119252997 (SCAF8)
Transcription machinery [BR:
tod03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119252997 (SCAF8)
Spliceosome [BR:
tod03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119252997 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119252997
NCBI-ProteinID:
XP_037376519
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MEAVKTFNSEDCASPPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQGVSFNKKLMDRFDFGEDSEHSEEP
KKEIPTSQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEANMDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLEGFAEGGMIDQETVNTEWETVKSSEPVKEAVQTTQSPTPVEKETVVTTQAEVFPPPVA
MLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPLPPPPFLRASFNPSQPPPGFMPPPVPP
PVVPPPTIPPVVPTSLVQPPLSMTPETVKDVGFGSLVLPGGSVPSNLATSTLPAGNVFNP
SAKVEPEEKVPHLIEHQISSGENARSVIPSDISSSPAILGGQLPNVTSSSGILGVQRPNV
SSNSEILGVRPPNVSSSSGMIGAQPPNVLNNSGILGIQPPNVSTSSGLLGVLPPNIHNNS
GLIGVQPPNVPNASGLLGTQPPAGPQNLPPLNISSQRMPAIPMLDVRPGLIPQTPGPRFP
LMQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLIPGRQSIDNVTNPEKR
IPVGNENIQQEGDRDYRFPPIETRESIGRPPPMDVRDVIGRPIDPREGPGRPPLDGRDHF
GRPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRDFDEREHRVIPVFAGPKGLHEERG
RFRSGTYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGRD
RIQNTWVPPPHARVFDFFEGATSQRKGDNVPQVNGENTERHAQPPPLPVQNDPELYEKLP
SSTEINKEKSDTVADIESEPVVESTETEGT
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaagaccttcaacagcgaggattgtgcctctcctcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattgtattccctgaatgactacaaacca
cccatttctaaagcgaaaatgacccaaattactaaggcagccatcaaagctattaagttc
tataaacatgtggtacagagtgttgagaaattcattcagaaatgtaaaccagaatacaag
gtacctggactttatgttattgactccattgtacgacaatctcgacatcagtttggtcaa
gaaaaggatgtttttgcacctaggtttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtattaaacttatggcaaaag
aacaatgtctttaagagtgaaatcattcagcctctcttggacatggccgcagggattcct
ccgccagttgtcactcctgttttggccagtacaaccgctgctatgagcaacaccccagga
actcctgtgacacctgttacgccagccaatgtggttcaaggtttacccgatccgtgggta
tcacagataacaaatacagatacacttgcagccgtagctcagatcttacaaagtccacaa
ggccaacagcttcagcagttaatacaaactctacagatacaacagcagaagcctcaacct
tccattctgcaggccctggatgccggtcttgttgtccagttgcaggctcttacggcacag
cttacagctgcagctgcagcagccaacacccttaatcccttagaacagggagtgtctttt
aacaagaagttgatggatagatttgattttggggaagattctgagcatagtgaagaaccc
aaaaaagaaattccaacttctcagctttctcatgtttcagaatctgtgaacaattccatt
tttcatcagatagcagaacaactacagcagcaaaaccttgaacatctcagacagcagctt
ttggaacaacagcagcctcaaaaggcaacccctcaagatagtcaagaagggacatttggg
tcagagcattctgcctcaccatcacaagggagcagtcaacagcatttcctggagcctgaa
gcaaatatggatgattccatagatattcagcaacaggatatggatatagatgaaggacaa
gatggagtggaagaggagatctttgaacaggaagcaaagaaagtggctgttcgctcaaga
tcaagaacacattcacgatctcgttcaaggtcaccaagaaaacgaaggtctaggtcacga
tctggttctcgaaagcgtaaacacagaaagcgatcacgttcccgttcaagagaaagaaag
aggaaatcctcacgttcatactcaagtgaaaggcgtgccagagaaagggagaaagaacga
cagaagaagggattgcctccaattagatctaaaacattaagtgtatgtagtaccactctg
tgggttggtcaagtggacaagaaggcaacacagcaagatttaaccaacctgttcgaagag
tttggacagattgaatccattaacatgattcctcccaggggctgtgcttatgtctgtatg
gttcatcgacaagatgcatttcgggctctccagaaacttagttctggatcatataaaatt
ggatccaaggttattaagattgcttgggctttaaacaaaggtgtgaaaacagaatacaag
caattctgggatgtggatcttggagttacatacataccatgggaaaaagttaaagtggat
gacttggaaggctttgcagaaggaggcatgatagaccaggaaactgtaaatactgagtgg
gaaactgtgaaaagctcagaacctgttaaagaggcggtccagacaactcagagtccaact
ccagttgaaaaggagacagtggtcacaacccaggcagaggttttccctccacctgttgct
atgttacagattccagtagcaccagctgtgcctacagttagtttagttccaccagcattt
cctgtgtcaatgccagttcctcctccgggattcagtccactccctccacctccttttcta
cgagcaagtttcaacccttcacaaccacctcctggtttcatgccacctccagttccacct
cctgttgttccaccacctactattccaccagtggtaccaacatctttagtgcagccgcca
ttatccatgactccagaaactgtgaaagatgttggatttggtagccttgttttaccaggt
ggttctgttcccagcaatcttgctacttccactctgccagctggaaatgtttttaatcct
tcagctaaagtagagcctgaagaaaaagtacctcaccttatagaacaccagatttcttct
ggtgaaaatgccagatcagtgattccaagtgatatttcaagtagccctgcaattttagga
ggacagctgccaaatgtgaccagcagttctggaattctgggagtccaaagaccaaatgta
tcaagtaattctgaaatccttggagtccggccgcctaatgtttcaagcagttctgggatg
attggagcccagccaccaaatgttctaaataactctggaattttggggatacagccacct
aacgtgtcgactagttctggacttttaggtgtgctgcccccaaatattcataataattct
ggactaataggagtacagccaccaaatgttccaaatgcttctggacttttgggaacacag
ccaccagctggacctcaaaacttgccccctctcaatatctctagtcagaggatgcctgca
attccaatgttagatgttcgtccaggacttataccacagacaccaggaccgagattccct
ttaatgcagcctggaattcctccccaaaggggtattcctcctccatcggtacttgattca
gctcttcatccaccaccccgtggtccttttcctcctggagatatttttagtcagccagaa
agaccttttctaattccaggaagacaaagtatagacaatgttactaatccagaaaaacgg
ataccagttgggaacgaaaacattcaacaggaaggagatagagattaccggtttcctccc
atagaaaccagggaaagcattggtagacctcccccaatggatgttagggatgtaattgga
cggcctatagatccaagagaaggtcctggaaggcctccattagatggtagggatcatttt
ggaagacctcctgttgacataagagagaatcttgtgagaccaggtatagatcatcttggt
cgaagagaccattttggctttaatccagagaagccttgggggcatagagattttgatgag
cgagagcatcgagtaatacctgtctttgctggtccaaaaggcttacatgaagaaagaggt
aggtttcggtctggaacctatcgatttgatcctagaagtggtccttggaacagaggattt
ggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcagagggat
agggatgacagagattttgatttctgccgagaaattaatggaaatcgtcttggacgcgat
agaattcaaaacacctgggtccctcctcctcatgctcgggtttttgatttttttgaaggg
gccacttctcaacgaaaaggtgataatgtgcctcaggttaatggtgaaaatactgagaga
catgctcaaccaccacctttaccagtacagaatgatcctgaactttatgaaaaactgccg
tcttcaactgaaataaacaaggagaagagtgacacagttgctgatatagaaagtgaacca
gtggtagaaagcacagaaactgaggggacataa
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