Talpa occidentalis (Iberian mole): 119259324
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Entry
119259324 CDS
T07495
Symbol
MSH2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod01524
Platinum drug resistance
tod03430
Mismatch repair
tod05200
Pathways in cancer
tod05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119259324 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119259324 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
119259324 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
119259324 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tod03400
]
119259324 (MSH2)
DNA repair and recombination proteins [BR:
tod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119259324 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
119259324
NCBI-ProteinID:
XP_037383995
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MAVQPKDTLQLESATEAGFVRFFQGMPEKPATTVRLFDRGDFYTAHGEDALLAAREVFKT
QGXVKYLGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDTSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETSGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGEEVNSAVLPEMENQVAVSSLSAVIKFLDILSDDSNFGQFELTTFDFGQYM
RLDIAAVRALNLFQGSVEDTSGSQSLVALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQALLLAIFVTPFIDLRSDFSKFQEMIETTLDMEQVENHEFLVKPSFDPNLSE
LRELMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKSEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNAAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETAAILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGICDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNFGESQYDEMEPAAKRCYLEREEGEKIIQEFLSKVKQMPFTEMSK
ENITVKLRQLKAEVVAKNNSFVNEIISRIKVTT
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccagccgaaggacacgctgcagctggagagcgcgaccgaggccggcttcgtg
cgcttcttccagggcatgccggagaagccggccacgacagtgcgcctctttgaccggggc
gacttctacacggcgcacggcgaggacgcgctgctggccgcgcgggaggtgttcaagacc
caggggntggtcaagtacctgggccccgcaggagcaaagactctggagagtgttgtgctt
agtaaaatgaattttgaatcttttgtaaaagatcttcttctagttcgtcagtatagagtt
gaagtttataaaaataaagctggaaataaggcctccaaagagaatgattggtatttggca
tttaaggcctcgccaggtaatctttctcagtttgaagacattctctttggtaacaatgat
acatcagcatccattggtgttgtgggtgttaaaatgtctacggttgacggccaaagacag
gttggagttgggtatgttgactccacacagaggaagttaggactatgtgagttccctgat
aatgaccagttctccaatctggaggctctgctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagacttcaggagacatgggaaaactgaggcaggttatccagagagga
ggaattctgatcacagaaagaaaaagagctgacttttccacaaaagatatttatcaggat
ctcaacaggttgttgaaaggcaaaaaaggagaagaggtgaacagtgctgtcttgccagaa
atggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagacatctta
tcagatgactcaaactttggacagtttgaactgactacgtttgactttggccagtacatg
agattggatattgcagcagtcagagctcttaatcttttccagggttctgtagaagatacc
tctggctctcagtctctggttgcattgctaaataagtgcaaaaccccacaaggacaaaga
ctggttaatcagtggattaagcagccactcatggacaagaacagaatagaagagagatta
aatttagtggaagcttttgttgaagatgcagagttgaggcagactttacaagaagattta
cttcgtcgtttcccagatcttaaccgacttgctaagaaatttcaaagacaagcagcaaac
ttacaagattgctaccgactctatcagggtataaatcaactgcctaatgttattcaggct
ctggaaaagtatgaaggaaaacaccaggcattgttgttggcaatttttgtgactcctttt
attgatcttcgttctgatttctccaagttccaggagatgattgaaacaactttagatatg
gaacaggtggaaaaccatgaattccttgtaaaaccttcgtttgatcctaatctgagtgaa
ttaagagaactaatggatgacttggaaaagaagatgcagtcaacattagttagtgcagct
agagatctaggcttggatcctggtaaacagattaaacttgattctagtgcacagtttgga
tattactttcgtgtaacctgcaaggaagaaaaagtccttcgtaacaataaaaacttcagt
acagtagatatccagaagaatggtgttaaatttaccaacagtaaattgacttctctcaat
gaagagtataccaaaaataaatctgagtatgaggaagcccagaatgccattgttaaagaa
attgtgaatatttcttcaggatatgtcgaaccaatgcaaaccctcaatgatgtgttggct
cagctagatgccgttgtcagctttgctcatgtgtccaatgcagcacctgtcccatatgta
cgaccagtcatcttagagaaaggacaaggaagaattacattgaaagcatccagacatgct
tgtgttgaagttcaggatgaagttgcctttattcctaatgatgttcatttcgaaaaagat
aaacagatgttccacatcattactggtcccaatatgggaggtaaatcaacatatatccgc
caaactggggtgatagttcttatggcccaaattgggtgttttgtgccctgcgagtcagca
gaagtatccattgtggactgcatcctggcccgggtcggagctggtgacagtcagttgaaa
ggagtctccacattcatggctgaaatgttagaaacggctgctattctcaggtctgcaacc
aaagattctttaataatcatagatgagttgggaagaggaacctctacctacgatggattt
ggattagcatgggcaatatcagagtacattgcaaccaagattggggctttttgcatgttt
gcaactcattttcatgaacttactgccttggctaatcagataccaactgttaataatcta
catgtcacagcactgaccactgaggagaccttgaccatgctttatcaggtgaagaaaggt
atctgcgatcaaagttttgggattcacgttgcagagcttgctaatttccctcgacatgtg
atagaatgtgctaaacaaaaagccctggaattggaggagtttcagaattttggagagtca
caatatgatgaaatggaacccgcagcaaagaggtgctatctggaaagagaggaaggtgaa
aaaattatccaagagtttctatctaaggtgaaacaaatgccgtttactgaaatgtcgaag
gaaaacatcacagtaaagttaagacaactgaaagctgaggtggtagcaaaaaataatagt
tttgtaaatgaaatcatttcacgaataaaggttactacgtga
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