Talpa occidentalis (Iberian mole): 119259542
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Entry
119259542 CDS
T07495
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tod03041
]
119259542 (DDX1)
03016 Transfer RNA biogenesis [BR:
tod03016
]
119259542 (DDX1)
Enzymes [BR:
tod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119259542 (DDX1)
Spliceosome [BR:
tod03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119259542 (DDX1)
Transfer RNA biogenesis [BR:
tod03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
119259542 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
119259542
NCBI-ProteinID:
XP_037384396
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKELGLAFEIPPHLKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVGLSKASDNFVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDEVHAKDNTRPGAN
SSEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDVLAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggggttatgcctgagattgcccaagccgtggaagagatg
gattggcttctcccaactgacatccaggcggaatctatcccgttgatcctaggaggaggt
gatgtccttatggctgcagaaacgggaagcggaaaaactggtgctttcagtattccagtc
attcagatagtttatgagactctgaaagaccaacaggaaggcaaaaaaggaaaaacaacc
attaaaactggtgcttctgtgctcaataaatggcagatgaacccatatgacagaggatct
gcttttgcaattgggtccgacggtctgtgttgtcaaagcagagaagtaaaggaatggcat
gggtgtagagctactaaaggactaacgaaagggaagcactactatgaagtctcctgtcat
gaccaggggttgtgcagagtcgggtggtcgtctatgcaggcttccttagacctgggtact
gataaatttggctttggctttggtggaacaggaaaaaaatcccataataaacaatttgat
aactatggagaggagttcactatgcacgacaccattggctgttacctggacatagataaa
gggcacgtcaagttctccaagaatggaaaagagcttggtctggcatttgaaataccccca
catttgaagaaccaagccctctttcctgcctgtgttttgaagaatgctgaactaaaattt
aacttcggtgaagaagaatttaagtttccacccaaggatggttttgttggtctttccaag
gcgtccgataattttgtcgtcaaatctcagcacacaggtaacgcacaggtggcccaaaca
aagtttctccccaatgctccaaaagctctcatcgttgagccctcccgagagttagctgag
caaactctgaataacgtcaagcagtttaagaaatacattgacaaccctaaattaagggag
ctcctgattattgggggtgttgcagcacgggatcagctctctgttttggataatggggta
gatatagttgttggcaccccaggaagactagatgatttggtgtccactggaaagctgaac
ttatctcaagttagattcctggtcctggatgaagctgatgggcttctttctcaagggtac
tctgatttcataaataggatgcataaccagattcctcagatcacctctgacggaaaaaga
ctgcaggtgattgtctgctctgctactttgcattcgtttgatgtaaagaaactttctgag
aagataatgcattttcccacctgggttgatttaaaaggagaagattccgttccagatact
gtacaccatgtggttgtcccagtgaaccccaaaactgatagactctgggaaaggcttggg
aaaaaccacatcagaacggatgaagtgcatgcgaaggataacacaagacctggtgctaac
agttcagagatgtggtctgaagctattaaaatcctgaagggggagtatgccgtccgggcc
atcaaggaacacaagatggatcaagcaattattttctgtaggaccaaaattgactgtgat
aacttggagcaatattttatgcagcaaggaggaggacctgataaaaaaggacaccagttc
tcctgcgtctgtcttcatggtgacagaaagcctcatgagagaaagcagaacttggaaaga
tttaagaaaggagatgtaagattcttgatttgtacagatgtagctgccagaggaattgat
atccatggtgtcccttatgtgataaatgtcaccctgcctgatgaaaagcaaaactatgta
catcgaattggcagagtgggaagagcagaaaggatgggtctggccatttccctggtggca
acagaaaaagagaaggtctggtaccacgtgtgcagcagccgcgggaagggctgttacaac
accaggctcaaggaggatggcggctgcaccatctggtacaatgagatgcagttgctgtct
gagatcgaagagcacctgaactgtaccatttctcaggtggagccagacataaaagtcccc
gtggatgaattcgacgggaaggttacctatggccagaagagagctgctggtggtggaaac
tataaaggccacgtggatgttttggcacctacagttcaagagttggccgcccttgaaaag
gaggcgcagacatccttcctgcatcttggctaccttcctaaccagctgttcagaaccttt
tga
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