Talpa occidentalis (Iberian mole): 119259571
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Entry
119259571 CDS
T07495
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119259571 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tod03021
]
119259571 (CPSF3)
03019 Messenger RNA biogenesis [BR:
tod03019
]
119259571 (CPSF3)
Transcription machinery [BR:
tod03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119259571 (CPSF3)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119259571 (CPSF3)
U7-dependent histone pre-mRNA processing factors
119259571 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
119259571
NCBI-ProteinID:
XP_037384445
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLLYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYTKRLEIMLQDIFGEDCVSVKDGSILGVTVDGKTANINLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccattccggctgaggagagtgaccagctgctgatccgaccccttggagctgga
caagaagtgggaagatcatgtattatcctggagttcaaaggaagaaaaataatgctggac
tgtgggatccaccctggcctggaaggaatggatgctcttccctatattgatttaattgac
ccagccgagattgatctcctcctcatcagtcatttccatttggatcactgtggagcattg
ccctggttcctacagaagacaagtttcaaaggaagaacatttatgactcatgccacaaaa
gctatttacagatggcttctttccgactacgtcaaagttagtaacatatcagcagatgac
atgctgtatactgagaccgatttggaagagagcatggacaaaattgaaaccatcaacttc
catgaagttaaggaagtggcggggatcaagttttggtgttaccacgcaggccacgttctc
ggagctgccatgttcatgattgaaatcgcgggtgtgaagcttttgtacacaggtgatttc
tcaagacaagaagatagacacttaatggcagctgaaattcctaatattaaacctgatatt
cttattattgagtctacatatgggacccacatccatgagaagcgtgaagaacgagaagcc
agattctgtaacactgtccatgatattgtaaaccgaggaggtagaggtctcatccctgtg
tttgctctcggaagggctcaggagctgctcttgattttagatgaatactggcagaaccac
ccagaactccacgatattcccatatactacgcgtcatccttggccaagaagtgcatggcg
gtctaccagacgtacgtgaacgccatgaacgacaaaatccgcaaacaaatcaacatcaac
aacccctttgttttcaagcacatcagtaacctcaagagcatggatcattttgacgacatt
gggcccagtgtggtgatggcctcccctggtatgatgcaaagtggcttatcccgagagctc
tttgaaagctggtgcactgataagcggaatggtgtcatcatagcagggtactgtgtagaa
gggacactcgccaagcatatcatgtccgaacctgaagaaatcactaccatgtctggacag
aagctgccgctgaaaatgtctgttgattacatttctttctctgctcacacagattaccag
caaaccagtgaatttatccgtgctttgaaaccgcctcatgtgattttagtccacggagaa
cagaatgaaatggccaggttgaaggcagccctgattcgcgaatatgaagacaatgacgaa
gttcacatagaggttcataaccctcggaacacagaggcagtgaccttgaacttcagagga
gaaaaactggcaaaggtcatgggctttttagcagacaaaaaaccagaacagggccagcgg
gtctcaggaatacttgttaaaagaaactttaattatcacatactttctccttgtgacctc
tccaattatactgacctggccatgagcactgtaaaacagacccaagccatcccgtatact
gggccttttaacttgctcttgtaccagctacagaaattgacaggtgatgtagaagaatta
gaaattcaagaaaagcctgctttgaaagtgttcaaaaatattactgtgatacaggaacca
ggaatggtggtattagaatggctggcaaacccttccaatgacatgtatgcagatacagtg
acaactgtgatactggaagttcagtcaaacccgaaaataaggaaaggcgctgtacagaag
gtttcaaaaaaattagaaatgcacgtttacaccaagaggttggagatcatgctgcaggac
atatttggagaagactgtgtgagtgtgaaagatggttctattcttggtgtcacagtggat
ggaaaaactgctaacataaacttggagacacggacggtagaatgtgaagaggggagtgag
gatgacgagtccctccgggagatggtggagctggctgcgcagaggctgtacgaggcgctg
acgccagtgcactga
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