Talpa occidentalis (Iberian mole): 119261404
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Entry
119261404 CDS
T07495
Symbol
RFC1
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03030
DNA replication
tod03410
Base excision repair
tod03420
Nucleotide excision repair
tod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119261404 (RFC1)
03410 Base excision repair
119261404 (RFC1)
03420 Nucleotide excision repair
119261404 (RFC1)
03430 Mismatch repair
119261404 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tod03032
]
119261404 (RFC1)
03400 DNA repair and recombination proteins [BR:
tod03400
]
119261404 (RFC1)
DNA replication proteins [BR:
tod03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119261404 (RFC1)
DNA repair and recombination proteins [BR:
tod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119261404 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
AAA_22
BRCT_2
RuvB_N
Rad17
AAA_5
AAA_30
Zeta_toxin
AAA_17
AAA_7
AAA_18
AAA_33
nSTAND3
AAA_16
RNA_helicase
AAA_19
NTPase_1
NPHP3_N
TIP49
Motif
Other DBs
NCBI-GeneID:
119261404
NCBI-ProteinID:
XP_037386591
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVSETVKKNEKTKSAEETLKAKKGIKEIKVNNSCKEDDSKQKQPN
KKKRIIYDSDSESEEAAQIINAKKQPEKLTLSSKPGKILRQDPVTYISETDEDDDFMCKK
AVSKAKENGRSTNSYLGVSNMKKNEENNKTKNKPLSPVRLTPTSVLDYFGTESVQRSDKK
MVASKRKEPSQNADDSRLNDEAIARQLQLDEDAELERQLHEDEEFARTLAMLDEEPKSKK
ARRDTEERETFSSVQANLSKAEKHKYPRKAEQFSDERKNCSPKKQIKYESSKESQQHPKS
SAHKIGEPSSPKASTKLALLKKKGESAYKEAEPLASKRKENAIELKGETKTPKKTKNSPA
KKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIE
RDEAKSLIERYGGKVTGNVSKKTSYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRTM
PGKKSKYEIAVEAEMKKEKSKLERTPPKNNQGKRKISPTKKESGSKKNKVTPQRDSSIKS
IKKEPNVFRKGLYFKEQVAEETDGGGIRAGNLADGSGENKVENLLWVDKYKPTSLKTIIG
QQGDQSCANKLLRWLQNWHKSPSEDKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTT
ASLVCQELGYNYVELNASDTRSKNSLKEIVAESLNNTSIKGFYSSGTAHSVSKKHALIMD
EVDGMAGSEDXGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
KGAMLSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNMSMWCARSKALTYDQAKADSHRA
KKDIKLGPFDVARKVFASGEETAHMSLVDKLDLFFHDYSIAPLFVQENYVHVKPVAAGGD
MKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPSFP
SWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTINMDYLSHIRDALVQPLTSQGVEGVQD
VVALMDTYYLMKEDFENIMEMSSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAI
KSSRHSTGPSLDSEYSEELHDDDSQLDEKDQDAMESDAMIKKKTKSSKPSKSEKDKESRK
GKGKSSKK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagcgggaagaagcttgtaagtgaaaca
gtaaagaagaatgaaaaaacaaagtccgctgaagaaactctaaaggcaaagaaaggaata
aaggaaattaaggtaaacaattcttgtaaagaagatgactctaaacagaagcagccaaac
aagaaaaagaggattatttatgattcagattcagaatcagaggaggcagcacagataata
aatgccaaaaagcaaccagaaaaattaacattgtcttctaaacctggcaaaattctccga
caagatcctgttacctacatttcagaaacagatgaagatgatgacttcatgtgtaagaaa
gcagtgtctaaagcgaaagagaatggaagatctacaaatagttatcttggagtatcaaac
atgaaaaagaatgaagaaaacaataagaccaagaataagcctttatcaccagtaagactt
acccctacatcagtgcttgattattttggaactgaaagtgtccaaagatcagataagaaa
atggtggcaagcaaaagaaaagagccttcacaaaatgcagatgattccagactaaatgat
gaagccattgccaggcaattgcaacttgatgaagatgcagagctggagagacaactgcat
gaagatgaagagtttgccagaacattagccatgttggatgaagaacccaagtccaaaaag
gctcgaagggacacagaagagagagaaacgttttcctctgttcaagcaaatttaagtaaa
gcagaaaaacataaatatcctcgtaaagcagaacaattttcagatgaaagaaagaactgt
agtcctaagaagcaaattaaatatgaaagttcaaaagaatctcagcaacatcccaagtca
tcagctcataaaataggagaaccatcttctccaaaagccagtactaaactggcacttctg
aagaaaaaaggagagagtgcttataaagaagcagagcctttagcctcaaaaagaaaagaa
aatgctattgaattgaaaggagagacaaaaacacccaagaaaaccaaaaattctccagct
aaaaaggagtctgtaagtcctgaagattctgaaaagagacggactaactatcaggcttat
cgaagctacttgaatcgagaaggtcccaaagctctaggctccaaagaaataccaaaggga
gctgaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtccattgag
cgagatgaggccaagtctctaattgagcgttatggaggaaaagtaacaggaaatgtcagc
aagaaaacaagctaccttgtcatgggtcgtgatagtggtcagtctaagagtgataaggca
gcagccttggggacaaatattattgatgaagatggccttttgaatctcattcgaactatg
ccaggcaagaagtccaagtatgaaatagctgttgaagctgagatgaagaaagagaagtcc
aaattggagcgaacacccccaaaaaacaaccaaggaaaaagaaaaattagtccaacaaag
aaggaatcaggatctaaaaagaacaaagtgactccccaaagagacagctctataaagtca
ataaaaaaggaaccaaatgtgtttcggaaaggcctgtacttcaaggaacaggtggctgag
gagacagatggtggtggtatcagggctgggaatttggctgatggcagcggtgaaaacaaa
gtagaaaatttgctctgggtggataaatataagccaacctcactcaagaccataattgga
cagcaaggtgatcagagctgtgccaacaagctcctacgctggctccaaaactggcacaag
agtccatccgaagataagaaacacgcagcaaagtttggtaaatttgctggaaaagatgat
ggctctagttttaaagcagcgttgctctcaggcccgccaggtgttggcaaaacaaccact
gcttctctggtttgtcaggaattgggatataactatgtggaactgaatgcaagtgacact
cggagcaagaacagtttgaaggaaattgttgctgaatcgcttaataataccagcatcaaa
ggcttttattcaagtggaacagcccattcagtaagcaagaaacatgctctcatcatggat
gaagtagatggcatggcaggcagtgaggacnagggaggaattcaggaattaattgggctg
ataaaacacacaaaaattcccattatttgtatgtgcaatgatagaaatcatcccaagatt
cgttctttggttcattattgttttgatcttcgttttcaaagacctcgggttgaacaaatt
aagggtgctatgctatctattgcatttaaagagggtttaaagattcctcctccagctatg
aatgaaataatcttgggagccaatcaagatatcagacaggttttacacaatatgagtatg
tggtgtgcacgaagtaaggcactaacctatgaccaagccaaggctgattctcatagagcc
aaaaaggatatcaaattgggcccatttgatgttgcccggaaggtatttgcatctggagag
gagactgctcatatgtcacttgtggacaaattggatctcttttttcatgattattcaatt
gcacccctttttgtccaggagaactatgtacatgtgaagcctgtagctgcagggggtgac
atgaaaaaacatttgatgcttttaagcagagcagcagatagcatatgtgatggtgaccta
gtggaccgtcagatccggagtaagcaaaactggagtcttctgcccacacaggccatttat
gccagtgttcttcctggagagttaatgagagggtacatgacccagtttcccagcttcccc
agctggttggggaagcactcctccacaggcaaacacgatcgaattgttcaggatctagct
ttgcatatgagtctcagaacttactccagcaaaaggactataaacatggattatctgtca
catataagggatgcacttgtacagcctttgacttcacaaggggttgaaggagtacaagat
gttgttgctcttatggacacatattatttgatgaaagaagactttgagaatatcatggaa
atgagcagctggggagggaaacccagtcccttttccaagctggaccccaaggtgaaagcc
gccttcacaagagcttacaataaggaagcccaccttactccatattcacttcaggcaata
aagtcatccagacacagcacagggccatccctggattctgaatatagtgaagagttacat
gacgatgactctcaattggatgagaaagaccaagatgctatggagagtgatgctatgatc
aagaaaaagacaaaatcttccaagccttcaaaatcagaaaaagataaggagtccagaaaa
ggaaaaggaaaaagttcaaagaaatga
DBGET
integrated database retrieval system
