KEGG   Trabulsiella odontotermitis: QMG90_02080
Entry
QMG90_02080       CDS       T09053                                 
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
  KO
K18765  RNase E specificity factor CsrD
Organism
toe  Trabulsiella odontotermitis
Brite
KEGG Orthology (KO) [BR:toe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:toe03019]
    QMG90_02080 (csrD)
Messenger RNA biogenesis [BR:toe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     QMG90_02080 (csrD)
SSDB
Motif
Pfam: EAL GGDEF GAPES4 DUF418
Other DBs
NCBI-ProteinID: WHP31762
LinkDB
Position
419635..421575
AA seq 646 aa
MRLTTKFSAFVTLLVGLAIFVTLVGCSLSFYNGIQIKLQHRVQAVAITLDNRLMTTPFDK
LRPQLDELLEPVDIVRLDFLVGGKPIFNHVRQVSYRPAGSSYQYRELEVSSLKNPGMTIH
VVYLDPMVNYFNSLSTTVPLTLAIAFMVLVIFFSVRWLRRQLAGQELLDSRSARILNGAR
GQQAKGSVHEWPARTSSALDMLLSEIQFASDQRSRMDTLIRSYAAQDTRTGLSNRLFFDN
QLATLLEDQEKVGAHGIVMMIRLPDFDLLRDNWGRTAAEEYLFTVINLLSTFILRYSGAL
LARYHRSDFAVLLPHRTLKEADSIASQLLKAMEALPTTKIRERDDMMHIGICAWRSGQST
NQVMEHAEAATRNAVLQGSNGWAVYDDSLPEKGRGNVRWRTMIEQMLTRGGPRFYQKPAV
TLEGRVHHRELMCRIYDGQEEVISAEYMPMVLQFGLSEEYDRLQITRLIPFLSFWPEENL
ALQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIFELAEADVCQHISRLQPVMRLISALG
VRVAVIQAGLTLVSTDWIQLLDVEIIKLHPGLVRNIEKRSENQLLVQSLVEACKGTSTRV
FATGLRRRGEWQVLTECGVTGGQGDFFAGSQPLDTSVKKYSQRYSV
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgcgattaacgacgaaattttcggcttttgtcacgctgctggtcggtctggcaattttc
gtaaccctggtgggttgctcgctgagcttttataacgggatccagattaagctccagcac
cgcgtgcaggcggtcgcgatcacgctggataaccgcctcatgacgaccccgttcgacaaa
ctgcgtccgcagctggatgagctgctggagcccgtcgacatcgttcgtctcgactttctc
gtcggtggaaaaccgatatttaaccatgtccggcaagtcagctatcgtcccgccggcagc
agctatcagtatcgcgagctggaagtcagttcgctgaaaaacccgggcatgacgattcat
gtggtctacctggatccaatggtgaattatttcaattcattatcgacgacagtgccgctg
acgctggcgattgcctttatggtgctggtgatttttttctctgtgcgctggctgcgacga
caactggccgggcaggagttgctggattctcgttcggcaaggatcttaaacggcgcgcgc
ggtcagcaggcaaaaggctcggtacacgaatggcccgcccgcaccagcagcgcgctggat
atgctgctctccgagattcagtttgccagcgatcagcgcagccgcatggatacgctgatt
cgctcttatgccgcccaggatacgcgcaccgggctgagcaatcgcctgttcttcgacaat
caactggcgacactgctggaagatcaggaaaaggtcggagcgcacgggatagtgatgatg
atccgtctgccggatttcgaccttttgcgtgataattgggggcgaacagccgcagaagag
tatctattcaccgtaattaacctactttctacctttatattgcgctattcgggtgcgctt
cttgcgcgttatcatcgtagtgattttgcggtgcttttgccgcaccggacgttaaaagag
gcagacagcatcgccagtcagctgttgaaagccatggaagcgctgccgacgacgaaaatc
cgtgagcgtgatgacatgatgcatatcggcatctgcgcctggcggagcggtcagtcgacg
aaccaggtgatggaacatgccgaagcggctacccgtaacgccgtgcttcagggaagtaac
ggttgggccgtgtatgacgattcgctaccggaaaaagggcgcggcaacgtgcgctggcga
acgatgatcgaacagatgttgacccgtggcggtccgcgcttctaccagaaaccggcagtg
acgcttgagggtcgggttcatcatcgtgaactgatgtgtcgtatttatgatgggcaagaa
gaagtcatctcggcggaatatatgccgatggtattacagttcgggttgtcggaagagtat
gaccggttgcagatcacgcgcctgattccttttctctcgttctggccagaagaaaatctg
gcgttgcaggtaacggtggagtcgttgatccgcccgcgtttccagcgctggctgcgggat
acattaatgcaatgcgaaaaatcgcaacgaaaacgcattatttttgaacttgctgaggcg
gatgtttgtcaacatatcagccgtttacagcctgttatgcgtttaattagcgctttaggt
gtacgcgtcgctgtgatacaagcaggtttaacgctggtcagtacggactggatccagctt
ctggacgttgaaattattaagcttcatccaggactggtgcgtaatattgagaagcgaagt
gaaaaccagcttctggtacaaagtctggtggaagcctgtaaaggcacctcgacccgggtt
tttgccaccgggctacgccgccggggcgagtggcaggtactgacagagtgtggcgtcacg
ggggggcagggcgatttttttgcgggctcacagccacttgacaccagtgtgaaaaaatat
tctcaaagatactctgtttga

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