Trabulsiella odontotermitis: QMG90_02535
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Entry
QMG90_02535 CDS
T09053
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
toe
Trabulsiella odontotermitis
Pathway
toe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
toe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QMG90_02535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
toe03019
]
QMG90_02535
03009 Ribosome biogenesis [BR:
toe03009
]
QMG90_02535
Enzymes [BR:
toe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QMG90_02535
Messenger RNA biogenesis [BR:
toe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QMG90_02535
Ribosome biogenesis [BR:
toe03009
]
Prokaryotic type
rRNA helicases
QMG90_02535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WHP31848
LinkDB
All DBs
Position
512243..514132
Genome browser
AA seq
629 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAEIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQSLREQTLDRLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDTESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERLMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRNLLGKLQPEGQELDME
TLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFERRGDRNDRNDRGPREDRPRRER
RDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGE
VLQHFTRTRILNKPMNMQLLGDAQPRTDRGGERRGGGRGFGGERREGGRTEGRRFSGERR
EGGRSFGGERREGRAPRRDDNGSSRRRDA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggtcttaaggctcctatcctcgaagca
ctcaacgatctgggttacgaaaaaccatccccgatccaggcggaatgtattccgcacctg
ttgggcggccgcgatgttctgggtatggcccagactggtagcggcaaaaccgcagcgttc
tctttgccgctgcttaataatcttgatccggaactgaaagcaccgcaaatcctggtgctg
gcgccgacccgcgaactggcggttcaggtcgctgaagcaatgacggatttctctaaacat
atgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgtcaggggccgcagattgtcgtcggtacgccgggtcgtctgctggatcacctg
aaacgcggtaccctggatctctctaaactgagcggtctggtactggatgaagctgacgaa
atgctgcgcatgggcttcatcgaagacgtagaaactattatggcggagatcccggaaggt
catcagaccgcgctgttctccgcaacgatgccggaagctatccgtcgcattacccgccgc
ttcatgaaagagccgcaggaagtgcgcattcagtccagcgtcaccacccgtcctgacatc
agccagagctactggactgtctggggcatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagactttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtagcagaagcccttgagcgtagcggctacaacagcgcagcgctgaatggcgacatgaac
cagtctctgcgtgagcagaccctggatcgcctgaaagatggtcgtctggatattctgatc
gcgacagacgttgcggcccgtggcctggacgttgagcgtatcagcctggtggttaactac
gatatcccgatggataccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgcgcgttgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gaacgtctgatgaagctgaccattccggaagtggaactgccgaacgcagaactgctgggc
aaacgccgtctggaaaaattcgcggcgaaagttcagcagcagctggaaagcagcgatctg
gatcagtatcgtaacctgctcggcaaactgcagccggaaggtcaggaactggatatggaa
acgctggccgctgcattgctgaaaatggcgcagggcgaacgtccgctgatcctgccgcca
gatgcgccgatgcgtccgaagcgtgagttccgtgaccgtgacgatcgctttgagcgtcgt
ggcgaccgtaacgatcgtaatgatcgtggtccgcgtgaagatcgtccgcgtcgcgagcgt
cgtgatgtgggtgatatggagctgtaccgcattgaagtgggccgtgatgatggtgttgaa
gttcgtcatatcgtgggtgctatcgccaacgaaggcgacatcagcagccgttacattggc
aacattaagctgtttgcgtctcactccaccatcgagctgccgaaagggatgccgggcgaa
gtgctgcagcactttacgcgtacccgcattctgaacaagccgatgaacatgcagctgctg
ggcgacgcgcaaccgcgtaccgatcgcggcggtgaacgtcgtggcggtggtcgtggtttc
ggtggcgagcgtcgtgaaggcggtcgtactgaaggtcgtcgcttctctggcgaacgtcgc
gaaggcggccgtagctttggtggcgagcgccgcgaaggtcgcgcaccgcgtcgtgatgat
aacggcagcagccgccgtcgtgacgcgtaa
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