Trabulsiella odontotermitis: QMG90_04710
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Entry
QMG90_04710 CDS
T09053
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
toe
Trabulsiella odontotermitis
Pathway
toe03410
Base excision repair
toe03430
Mismatch repair
toe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
toe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QMG90_04710 (recJ)
03430 Mismatch repair
QMG90_04710 (recJ)
03440 Homologous recombination
QMG90_04710 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toe03400
]
QMG90_04710 (recJ)
DNA repair and recombination proteins [BR:
toe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QMG90_04710 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QMG90_04710 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QMG90_04710 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
PEP-utilizers
Motif
Other DBs
NCBI-ProteinID:
WHP32241
LinkDB
All DBs
Position
950931..952664
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AA seq
577 aa
AA seq
DB search
MKPQIQLRRREVDDTVQLPDDLPALLRRLYVSRGVKSADDLERSVKGMLPWQQLSGVEKA
VEILYNAFREGVRIMVVGDFDADGATSTALSVLAMRALGCENVSYLVPNRFEDGYGLSPE
VVEQAHARGAQLIVTVDNGISSHAGVERAHALGIPVLVTDHHLPGDTLPAADAIINPNLR
DCHFPSKSLAGVGVAFYLMLALRTHLRDNGWFEARGIAVPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEVSNRDAQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNPGEARVLANELDALNQTRKEIEQGMQAEALTLCEKLERSRATLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLHP
GLMIKFGGHAMAAGLSLEEARFDEFQLRFGELVTEWLDPSLLQGEVVSDGPLTPAEMTLE
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRIVGERHLKVMVEPVGGGPLLDGIAFNIDTT
CWPDNGVREVELAYKLDINEFRGNRSVQLIIDNIWPG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccacagattcaacttcgtcgtcgtgaagtcgacgacacggtgcaacttcccgac
gatctccccgcgctgctgcgccgtctgtacgtcagtcggggcgtgaaaagcgccgatgat
ctcgaacgtagcgtcaaagggatgctgccctggcagcagctcagtggcgtggaaaaagca
gtggagatcctctacaacgccttccgtgaaggggtgcggatcatggtggtgggcgatttc
gatgccgacggcgccaccagtacggcactcagcgtgctggccatgcgcgcgctgggctgt
gaaaacgtctcctatctggtgcctaaccgttttgaagatggttacggcctcagcccggaa
gtagtcgaacaggctcacgcgcgtggcgcgcagctgatcgtcactgtcgataacggtatc
tcttcccacgccggggtggaacgcgcgcatgcgttaggtatcccggtgctggtcaccgat
caccacctgcctggcgatacacttcctgccgctgacgcgatcatcaaccccaatctgcgc
gactgccatttcccgtcaaaatcactggcgggggtcggtgttgcgttttatctgatgctg
gcgctgcgcacgcatctgcgtgataacggctggtttgaggcacgtggcattgcggtgccg
aatctggcggaactgctggatctggtcgcgttgggaaccgtggctgacgtggtcccgctt
gatgccaacaaccgcattcttacctggcaggggctgagccgcattcgtgcggggaaatgc
cgcccgggaattaaagcgttactggaagtctctaaccgcgacgcgcaaaagctggcggca
agcgatctcggctttgcgctggggccgcggctgaatgcggcagggcggctggatgatatg
tctgtcggcgtggcgctgttgctgtgcgacaaccccggtgaagcacgagtgctggcgaat
gaacttgatgcgctcaaccagacgcgcaaagagatcgagcaggggatgcaggcggaagcg
ctgaccctgtgtgaaaaactggaacgcagccgtgcgacgctgccgggcgggctggcgatg
taccatcccgaatggcaccagggcgtggtgggtattctggcatcgcggatcaaagaacgc
tttcatcgtccggtgatcgctttcgcccctgcgggcgatggcacgctgaaaggctccgga
cgttccatccaggggctgcacatgcgcgatgcgctggagcggctggatacgctgcatccg
ggcctgatgatcaaattcggcggccatgccatggcggcgggcctgtcgcttgaagaggcg
cgtttcgacgaattccagctgcgcttcggcgaactggtgacggaatggctcgacccgtcg
ctgttgcagggcgaagtggtctccgatggtccacttactcctgcggaaatgacgctggaa
gtggcgcagatgctgcgcgatgccggtccgtggggacaaatgtttccagagccgttgttc
gacgggcgttttcgcctgctgcaacagcgcatcgtgggcgagcgccatctgaaagtcatg
gtggagccagtcggcggtgggccgctgctggacggcatcgcttttaatatcgacaccacc
tgctggcccgataacggcgtgcgtgaagtggagctggcgtataagctggatatcaatgag
tttcgtggcaaccgaagcgtacagctcatcattgacaatatctggcccggataa
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