Trabulsiella odontotermitis: QMG90_16640
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Entry
QMG90_16640 CDS
T09053
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
toe
Trabulsiella odontotermitis
Brite
KEGG Orthology (KO) [BR:
toe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toe03400
]
QMG90_16640 (sbcC)
DNA repair and recombination proteins [BR:
toe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QMG90_16640 (sbcC)
Archaeal homologous recombinant proteins
QMG90_16640 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
T2SSE
ABC_tran
AAA_21
cobW
ABC_ATPase
AAA_15
MobB
AAA_22
NTPase_1
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
WHP30392
LinkDB
All DBs
Position
3512484..3515624
Genome browser
AA seq
1046 aa
AA seq
DB search
MKILSLRLKNINSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGVSYRAFWSQNRARNQPDGNLQAPRVELARSE
DGKILADKVKDKLDLTASLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKNARTELEKWQAQASGVQMLSDEQQQALQQRLQALTTEEQQTLTAQA
QLQTQLQWLHRQQELETQQQLSQTRLRDAQQALVAAQPQLETLTRTQPAEQLRPLWTRLQ
EQTATVADTRRQSEEVNTRLHASLRLRDRIWRSAEQQHSALREQEKRVADWIEQHEHFRQ
LATMLSGWQATFSQLSRDGAQLATLRQKQHELEQKRLALPDSGLTLDGDALARALAQHSA
LRPQRQQLAALHGQFLPLQQRLQRLQEGLIARQNEQAQMETQLQQRRQHYKEKQQQYVDV
RTLCEQEATIVKLEAERARLQAGLPCPLCGSTEHPAVAEYQAIVPGVNQARRDELEREVN
KLKEEGAALRGQLEALQKQTQNDTQEADALRQQTLALTAQWQQVISELQITLSPTDDIAG
WLKQQDDEEQQLWQASQRLSLQSQINELQQQYEQLTQEGEARLQVLDDALRPFNLTLPAT
GEETHWLAARNEDARQWQTQQTEQQTLQQQRSALVPLLETLPKPATEETLEPAPLDGWQQ
VHHDCVSLHSQWQTRQQQEALENERLTALQKQFTDALVASPFADQPAFLAALLDENTRQT
LEQLKTELEKAVQQGQTLAEQAQAALQQHQQTPPAALDATRPLDELQQQLQHFTQQLREN
TSLQGEIRQQLKQDADNRQYQQALMEKITQATRQVEDWSWLNALIGSKEGDKFRKFAQGL
TLDNLVWLANHQLTRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLA
LALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKIIGVISHVEAMKE
RIPVQIKVKKINGLGYSRLDKTFAVE
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcgacttaaaaatatcaactccctcaaaggtgaatggaaaatc
gacttcaccgccgagccgttcgccagcaacggtttgtttgccatcaccggcccgaccggc
gcagggaaaaccacgctgctggacgccatctgcctcgcgctttaccacgaaaccccgcgt
ctgaacaccgtctcacaatcgcaaaatgatctgatgacccgcgacaccgccgagtgtctg
gcggaggtggaattcgaggttaaaggggtcagttaccgtgccttctggagtcagaaccgc
gcgcgtaatcagccggacggaaatttacaggcaccgcgggtggagctcgcccgcagcgaa
gacggcaaaattctggcagataaagtcaaagacaagctggatctgaccgcctcgctgacc
gggctcgattatggccgtttcacccgttcgatgctgctgtcgcaggggcaattcgctgcc
tttcttaacgcaaaacccaaagagcgggctgaattgctcgaagagctgaccggcacggaa
atctacgggcaaatttcggcgatggtgttcgaaaaacacaaaaatgcccgtaccgaactg
gaaaaatggcaggcgcaggcatccggcgtgcagatgctcagcgacgagcaacagcaggcg
ttgcagcaacgtttgcaggcacttactacggaagaacagcagacgctgactgctcaggca
cagttgcagacgcagctccagtggctccaccgccagcaggagctggaaactcagcagcag
cttagccagacccgcttacgcgacgcacaacaggcgttagtggcggcgcaaccacaactg
gagaccctgacccgcacgcaacctgccgaacagttacgcccgctatggacgcgcctgcaa
gaacagacggcgacagtcgctgacacccgtcggcagagcgaggaagtaaatactcgctta
cacgcctcgctgcgcttgcgtgaccgcatctggcgcagcgccgaacagcagcacagtgcc
ttgcgcgaacaggaaaaacgcgtcgcagactggatcgaacagcatgaacactttcgccag
ttggcaacgatgctgagcggctggcaggccactttctcccagctctcgcgggatggcgcg
caactcgccacgctgcggcaaaaacaacatgagctggagcaaaaacgcctggcgctgcca
gattccggcctgacgctggacggcgatgccctcgcgcgagcactggcgcaacacagcgcc
ctgcgaccgcaacgtcagcaactcgctgccctgcacggccagtttttaccgctgcaacaa
cgcttacaacggttgcaggaagggttaatcgcgcgccagaacgagcaggcgcaaatggaa
acccaactgcaacagcgacgccagcactataaagaaaaacagcagcagtatgttgacgtg
cgtaccctgtgcgagcaggaagccaccattgtgaagctggaagcggagcgcgcgcgtttg
caagccgggctgccctgcccgctgtgcggctcaacggaacatccggcagtggcggaatat
caggccatcgttcccggcgtgaatcaggctcgccgcgatgaacttgagcgcgaagttaat
aagctgaaagaggaaggcgcggcgctgcgggggcaactggaggcgttgcagaagcagacg
caaaatgacacgcaggaagcggacgctctgcgccagcaaacgctcgcgctcacggcacaa
tggcaacaggtgatcagcgaactacagatcacgctgtcacccacggacgatatcgccggc
tggctgaaacagcaggacgatgaagaacagcaactctggcaggccagccagcggctcagc
ctgcagagtcagatcaacgaattacagcagcaatatgagcagctgacgcaggaaggtgag
gcgcgtttacaggtgctcgacgacgcgctccgcccgtttaacctgacgctgcccgcgact
ggcgaagaaacgcactggctggcggcgcgcaatgaagatgcccgtcagtggcagacgcag
caaacggagcaacagacgctccagcaacagcgtagcgcgctggttccgttgctggaaacg
ctgccaaaacctgctacggaagagacactggagcctgcgccgcttgatggctggcagcag
gtgcatcatgactgcgtgtcgttgcacagccagtggcaaacgcgccagcagcaggaagcg
ctggagaacgaacgactgaccgcgttgcagaaacagtttaccgacgcgctcgtcgccagc
ccgtttgccgatcaacccgcttttctggccgccctgcttgatgagaacactcgccagacg
ctggaacagttgaaaacagagctggagaaagcggttcaacaagggcagacgctggcagaa
caggcgcaggcggcgctgcagcagcatcagcaaacaccacccgccgcgctggatgccaca
cgaccgcttgacgagttacagcaacagttgcagcacttcacgcaacaactgcgcgaaaac
acctcgctacagggggagatccgccagcaactgaaacaggatgccgacaaccggcagtat
cagcaggcgctgatggagaaaatcacccaggccacccggcaggtggaggactggagctgg
ctcaacgcgctgatcggttcaaaagaaggtgataaattccgcaaatttgcccaggggctg
acgctcgacaatctggtgtggctggcgaatcatcaactgacccgcctgcatggccgctat
ctgttgcagcgcaaagccagcgacgcgctggagctggaagtggtcgatacctggcaggcc
gatgcggtgcgcgatacccgcacgctgtccgggggcgagagcttcctcgtcagcctcgcg
ctggcgctggcgctttcagatctggtcagccacaaaacgcggatcgactcgctgttcctc
gatgaagggtttggcacgctggatagcgaaacgctggataccgcactcgatgcgcttgat
gcgctgaatgccagcggcaaaatcatcggcgtcatcagccacgttgaggcgatgaaagag
cgcattccggtgcagatcaaagtgaagaaaattaacggtctgggctacagccggctggat
aaaaccttcgcggtggagtga
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integrated database retrieval system
