Trabulsiella odontotermitis: QMG90_17910
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Entry
QMG90_17910 CDS
T09053
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
toe
Trabulsiella odontotermitis
Brite
KEGG Orthology (KO) [BR:
toe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
toe03021
]
QMG90_17910 (rapA)
Transcription machinery [BR:
toe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
QMG90_17910 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
DUF2482
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WHP30622
LinkDB
All DBs
Position
3783421..3786327
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDTRMVTLLFPATGENRLYARNDSPITRVMFNPGDT
VTSHDGWQLLVDEVIEEKGLLAYIGTRQDTQEANVMLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKYQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMVLHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DADNPFDTEQLVICSLDFVRRNKERLEHLCDAEWDLMVVDEAHHLVWSEAAPSREYQAIE
QLAARVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVAEQKNYRPIADAVALLL
AGTRLNDEQLNTFGDLIGEQDIEPLLQMANSDRDGAEDARQELITMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEERARDMLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSVYSQLINYLAAPEEN
DGFDDLIKSCREQHDALKAQLEQGRDRLLEIHSNGGEKAQQLAESIEEQDDDTGLINFAM
NLFDIIGINQDDRGENMIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWV
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLHRFLPPTP
VRMLLDKNGNNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQPDVHAILQQGEAQVEKAAR
ALIEAARREADDKLSAELSRLEALKAVNPNIRDDELAAIESNRQQVLESLSQAGWRLDAL
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggattagcgatacagagagcgaactgggattagga
accgtagtagcgctggacacgcgcatggtaacccttctttttccggcgacaggtgaaaac
cgtctgtacgcacgcaacgactcccctatcacccgcgttatgtttaacccgggcgacacc
gtcaccagccacgacggctggcaactcctcgttgatgaagtgattgaagaaaaaggcctg
ctggcctacatcggtacccgccaggacacgcaggaagccaacgtgatgctgcgtgaagtg
ttactcgacagcaaactggtgttcagcaaaccccaggaccgcctgttcgccgggcagatc
gaccggatggatcgcttcgccctgcgctaccgcgcccgcaaataccagagcgagcagtac
cgtatgccgtggagcggcctgcgcggccagcgtacgtcgctgatcccgcatcagttgcac
atcgcccatgatgttggccgtcgccacgcgcctcgcgtgttgctggcggatgaagtgggt
ctgggaaagaccattgaagccgggatggtgctgcatcagcaattgctgtccggcgccgcc
gagcgcgtgctgattatcgtgccggaaaccctgcagcatcagtggcttgtcgaaatgctg
cgtcgtttcaacctgcgtttcgcgctgtttgacgacgaacgctacgccgaagcgcaacat
gacgctgacaacccatttgataccgaacagttggtgatctgttccctcgatttcgtgcgc
cgtaataaagagcgtctggaacatctgtgcgacgctgaatgggatctgatggtggtcgat
gaagcccatcatctggtgtggagcgaagcggcgccgagccgtgaatatcaggccattgag
caactggctgcccgtgtgccaggcgtgttgctgttgacggcgacccctgaacagctcggg
atggaaagccacttcgcccgtttgcgcctgctggatccgaaccgttttcacgacttcgcc
cagtttgtcgctgagcagaaaaattaccgcccgatcgccgatgccgtggcgctgctgctg
gcagggacgcgtctgaatgacgaacaactgaatacctttggcgatctgattggcgagcag
gatattgaaccgctgctgcagatggcaaacagcgatcgcgacggcgccgaagatgcacgt
caggagctgatcaccatgctgatggaccgacacggcaccagccgcgtgttgttccgcaac
acccgcaatggcgtgaaaggtttcccgaaacgcgaactgcataccatcaagctgccgctg
ccgacgcagtatcagacggcgattaaagtctccggcattatgggtgcgcgcaaaagtgct
gaagagcgtgcccgcgacatgctttatccggagcagatctatcaggaatttgaaggcgac
agcggcacctggtggaacttcgacccgcgtgttgaatggctgatgggctacctgaccagc
catcgttcacagaaggtgctggtgatttgcgccaaagccgccacggcgctccagctggaa
caggtgttgcgcgagcgggaaggtattcgcgccgccgtcttccatgaaggaatgtcgatt
atcgaacgcgaccgcgctgccgcctggtttgctgaagaagataccggcgcccaggtgctg
ctgtgctccgaaatcggatcagaaggccgcaacttccagttcgccagccacctggtgatg
ttcgatctgccgtttaacccggacctgctggagcagcgtatcgggcgtcttgaccgtatc
ggtcaggcgcacgacattcagatccacgttccgtatttagaaaaaaccgcccagtcggtg
ctggtgcgctggtatcacgaaggcttagatgcctttgaacatacctgcccgaccggtcgc
gcgatttacgacagtgtttacagccagttgattaactacctggcggcgccggaagagaat
gacggtttcgatgatctgatcaaatcctgccgcgaacaacatgatgccctgaaagcccaa
ctggagcagggtcgtgaccgcctgctggaaattcactccaacggcggtgaaaaagcgcag
cagcttgcggagagcattgaagagcaggatgatgataccgggctgattaatttcgccatg
aacctgttcgacatcattggcatcaaccaggatgaccgcggcgaaaatatgattgtcctg
acgccgtccgatcatatgctggtgccggatttccctggcctgccggaagatggctgcacc
attacgtttgaacgcgatgtcgccctgtcccgcgaagacgcgcagttcatcacctgggtg
cacccgctgatccgtaacggtctcgacctgatcctctccggcgataccggcagcagcacc
atttcgcttctgaaaaacaaagcgctgccagtgggtacgttgctgctggagctgatatac
gttgtcgaagcgcaggcaccgaaacagctgcagctgcaccgcttcctgccgccaacgccg
gtacgtatgctgctcgataagaacggcaacaacctggccggtcaggtggagtttgaaagc
ttcaaccgtcagttgagcgcagtgaaccgccatactggcagcaagctggtgaacgccgta
cagccggatgtgcatgcgatcctgcaacagggggaagcgcaggtggaaaaagccgcccgt
gcactgattgaggcggcccgtcgcgaagcggatgataagctgagcgcggaactgtcgcgt
ctggaagcgctgaaagccgtcaacccgaatatccgtgacgacgaactggcagcaatcgaa
agtaaccgtcagcaggtgctggaaagcttatcgcaggctggctggcgtctggatgcgctg
cgtctggttgtggtgacacaccagtaa
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