Trabulsiella odontotermitis: QMG90_21045
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Entry
QMG90_21045 CDS
T09053
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
toe
Trabulsiella odontotermitis
Pathway
toe03420
Nucleotide excision repair
toe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
toe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QMG90_21045 (uvrD)
03430 Mismatch repair
QMG90_21045 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toe03400
]
QMG90_21045 (uvrD)
Enzymes [BR:
toe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QMG90_21045 (uvrD)
DNA repair and recombination proteins [BR:
toe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QMG90_21045 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
QMG90_21045 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Reg_prop
Motif
Other DBs
NCBI-ProteinID:
WHP31189
LinkDB
All DBs
Position
complement(4424004..4426166)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRTNMLVLAGAGSGKTRVLVHRIAWLLSVENSSPYSIMAV
TFTNKAAAEMRHRISQLMGTSQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGLRPHHIQSYGNPMEQTWIDVYKAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
DGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQASRDRQLTLWQACRELLQEKALAGRAASALQRFLELIDALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYQDEDEDLLPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRATVSRPVSHQRLG
TPVTENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagcctcaatgataaacagcgtgaagccgtggcggcg
ccgcgcaccaatatgctggtgctggcgggggcgggcagtggtaagacgcgtgtgctggtg
catcgcatcgcctggctgctgagcgtggaaaacagctcgccgtattcaattatggcggtg
acgttcaccaacaaagcggcggcggaaatgcgtcatcgtatttcgcaactgatgggcacc
tcccagggtggcatgtgggtcggtacttttcacggtctggcgcatcgtctgctgcgggcg
catcatctggatgccaacctgccgcaggatttccagatcctcgacagcgaagatcaactg
cgtctgctgaaacgcctgatcaaagccatgaatcttgatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggtcagaaagatgaagggctgcgcccgcatcatatccag
agttacggtaatcccatggagcaaacctggatcgatgtctataaggcctatcaggaagcc
tgcgaccgtgccgggctggtggattttgccgaactgctgctgcgtgcgcatgagctatgg
ctcaacaagccgcatatcctgcaacactaccgcgaacgcttcactaatatcctcgtcgac
gaattccaggataccaacaacattcagtacgcgtggatccgtctgctggcgggcgacacc
ggcaaagtgatgatcgtcggcgacgatgatcagtcgatctacggctggcgcggcgcgcag
gtggaaaacatccagcgtttcctgaacgatttcccgggtgcggaaaccatccgcctggag
cagaactaccgttcgaccagtaatatcctcagcgcggcgaatgccctgatcgaaaacaac
gatggccgcctcggtaaaaaactctggaccgacggggtcgacggcgaaccgatttccctc
tactgcgccttcaacgaactggatgaagcacgctttgtggttaaccggatcaaaacctgg
caggacaacggcggcgcgctggaacaatgtgccattctttatcgcagcaacgcccagtcg
cgtgtgctggaagaggcgctgctgcaggcgagtatgccgtaccgtatttacggcggtatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcctatttgcgtctgattgccaac
cgcaatgacgacgcggcgtttgagcgtgtggtgaataccccgacgcgtggtattggcgat
cgcacactggacgtggtgcgccaggcgtcgcgtgatcgtcagttgacactatggcaggcc
tgtcgcgaactgttgcaggaaaaagccctcgccgggcgcgctgccagcgcgttacagcgt
tttctggaactgattgacgcgctggcgcaggaaacggccgacatgccgctgcatgttcag
accgaccgggtcattaaagattctggcctgcgaatgatgtacgaacaggaaaaaggcgag
aagggtcaaacgcgtatcgaaaacttagaggaactggtgacggcaacgcgccagttcagc
tatcaggatgaagacgaagatctgctaccgctgcaggcattcctgtctcatgccgcactt
gaagcgggcgaagggcaggcagacacgtggcaggatgctgttcaactgatgacgctccac
tcggcaaaagggctggagttcccacaggtgtttatcgtcggcatggaagaggggatgttc
ccgagccagatgtcgctggatgaaggcggtcgtctggaagaagaacgtcgtctggcctat
gtgggcgtaacccgtgcgatgcaaaaattgacgctgacctacgccgaaacacgccgtctg
tatggcaaagaggtgtaccaccgtccgtcacggtttatcggtgaactgcctgaagcctgc
gttgaagaggtacgtttacgcgcgacggtgagccgcccggtcagccatcagcgtctgggt
acgccggtgacggagaacgatactggctacaagctgggccagcgcgtgcgtcacgcgaag
tttggcgaggggactatcgtcaatctggaaggcagcggtgagcacagccggttgcaggtg
gcgttccagggccagggcatcaaatggctggttgccgcttatgcgcgccttgaaactgtg
taa
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