Thermoleptolyngbya oregonensis: HNI00_03635
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Entry
HNI00_03635 CDS
T09452
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tog
Thermoleptolyngbya oregonensis
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tog03400
]
HNI00_03635 (sbcD)
DNA repair and recombination proteins [BR:
tog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HNI00_03635 (sbcD)
Archaeal homologous recombinant proteins
HNI00_03635 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WOB42351
UniProt:
A0AA96Y3D4
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All DBs
Position
844611..845930
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AA seq
439 aa
AA seq
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MIRLLHLSDIHLGSGLLHGRVNPETGANTRLEDFGRSLERCIDRAIAESVDLVLFGGDAF
PDATPPPKVQEIFAQQFRRLVDADIPTVLLVGNHDQHTQGQGGASLCIYRTLGVPGFVVG
DRLETHRITTRSGEVQVITLPWLTRSTLLSRPDTEGRSLAEVDNLLLERLRVALEGEIRR
LDPDLPTVLLAHLMTDTARFGAERFLAASKGFTVPMALLTRPCFDYVALGHVHRHQILCD
QPPVVYPGSIERVDFSEEAEDKGYVLVSLERGKAVVEFCPLPVRPFQTLSVDLTDAADPQ
ATLLSHLQQTLLADAVVRLVYKILPEQAEEIDQAALHEALKSAHTYSIYPEVQSQLARPR
LPELGAGNELDPIEALKTYLEHHPHLSGLADDMLAAAKNLLAGDCPEDLTLSDVPLEIDS
TDTTAAALEEPANAQLRLL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgattcgactgctgcacctgtcagacattcacctcggcagtggactgctgcacgggcgc
gtgaacccagagacgggcgcaaacacgcggctggaagactttgggcgatcgctggagcgg
tgtatcgatcgggcgatcgccgaatccgttgacctggtgctgttcggcggggatgccttt
cccgatgccacgccgccgcccaaggtgcaggaaatctttgctcagcagtttcgtcgcctg
gtggatgctgacattcccacggtgctgctggtgggcaaccacgaccagcatacgcagggt
cagggcggcgcgagtttgtgcatttaccgaaccctgggcgtgccggggtttgtggtgggc
gatcgcctggaaacccaccggattaccacccgcagcggcgaggttcaggtcatcacgctg
ccctggctaacccgctctaccctgctcagccgccccgacaccgaagggcgatcgctggca
gaggtcgataacttactcctggaacggctgcgggtagcgctggagggcgaaattcggcgg
ctcgacccagatttgcccaccgtcctgctggcgcacctgatgactgacaccgcccgcttt
ggcgcagagcgcttcctcgccgccagcaaggggttcaccgtgccgatggcgctgctgacc
cgtccctgttttgactacgtagcgctgggtcacgttcatcgccaccagattctctgcgac
caaccgcccgtggtctatccgggcagcatcgagcgggtagactttagcgaagaagccgaa
gacaaaggctatgtgctggtgtccctagagcgcggcaaagcagtggtggaattttgcccg
ctgcctgtgcgcccttttcagaccctcagcgtggatctgacggatgcagcagacccacaa
gcgacgctcctgagccacctccagcaaaccctgctggccgatgcggtggtgcgcctagtc
tacaaaattctgccagagcaggctgaggaaattgaccaggccgccctgcacgaagccctg
aaatcagcccatacctacagcatctatcccgaagtgcagagccagcttgcccgaccgcga
ctgccagagttgggtgcaggcaacgagctagacccgattgaagccctgaaaacttacctg
gagcatcacccccacctgagcgggctggcagacgacatgctggctgcggcaaaaaacctg
ctggcaggggattgtcctgaggatcttacgctcagcgacgtgccgctggaaatcgattca
accgacaccacggccgccgccctagaagagcctgcaaacgcccagttgcgcttgctctaa
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