Thermoleptolyngbya oregonensis: HNI00_03805
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Entry
HNI00_03805 CDS
T09452
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tog
Thermoleptolyngbya oregonensis
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tog03032
]
HNI00_03805 (topA)
03400 DNA repair and recombination proteins [BR:
tog03400
]
HNI00_03805 (topA)
Enzymes [BR:
tog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HNI00_03805 (topA)
DNA replication proteins [BR:
tog03032
]
Prokaryotic type
DNA Topoisomerases
HNI00_03805 (topA)
DNA repair and recombination proteins [BR:
tog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HNI00_03805 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WOB42379
UniProt:
A0AA96Y4B7
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All DBs
Position
complement(886506..889373)
Genome browser
AA seq
955 aa
AA seq
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MSTLVIVESPTKAKTIRNYLPPGYRVEASMGHVRDLPQSASDIPASVKGEEWAKLGVNVD
ADFEPLYIVPQDKKKVVKALKEALKQADELILATDEDREGESISWHLLQLLQPKVPTKRM
VFHEITEEAIREALQNCRDVDEQLVHAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRLLVNRERQRRAFRKGSYWDLKATLEKDGSSFESKLVTLGGRRIATGADFDESTGQ
IIAGRDVLLLGEAEAQALHDRLQSATWTVTGLEERSSTRKPSPPFTTSTLQQEANRKLRL
SARDTMRVAQSLYEQGYITYMRTDSVNLSQQAIAAARSCVQQMYGSEYLSPEPRRYSTKS
KGAQEAHEAIRPAGSTFRTPQETGLSGREFQLYDLIWKRTVATQMAEVRQTNITVQIQAE
DAGFRATGKRIDFPGFFRAYVEGSDDPDAAIENQEVILPVLREGDHPNCQELEAIAHETQ
PPARYTEASLVKTLESEGIGRPSTYASIIGTIIDRGYAQMVNNSLVPTFTAFAVTSLLEK
HFPDLVDTSFTARMERTLDDISTGEADWLPYLQQFYLGETGLDGQVKQRESQIDPAEARS
VDLEGLDAKVRIGRYGAYIETETEEGPVKATIPQDFTPSDLDAERVEVLLRQKTEGPDKL
GFHPETGEPIYVLIGAYGPYVQLGDVTDENPKPKRASLPKGVQPQDVTLEQAVNLLALPR
LLGMHPETGCKIQANLGRFGPYIVHDQGKNGKDYRSIKGDDDVLTITLERALELLAEPKA
GRGRGRAAAPIRELGPHPEDGEPVNLYNGPYGVYIKHGKLNASLPEGEKAESISMEAALK
ALAEKAATKKTSRRSSKTGDAGTKTSATKTATKTTKTTRAKAGTAKSSTAKSSTTKAAAA
KKTTKSAKSTAEAEAEVTPTEPAPAQKTAAKSTPAKSTTQKAASTTRSTKSTKAS
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactctcgtcattgtcgaatcccccaccaaagcgaaaaccatccgcaactacctg
ccgccgggctatcgggtcgaggcatcgatgggccatgtgcgagatttgccccagtcggcg
agcgacattcccgcttcggtcaagggcgaagagtgggcaaaactgggggtcaacgtagac
gcagattttgagccgctctacatcgtgccgcaggacaagaagaaagttgtcaaggcgctg
aaagaggctctaaaacaggccgacgagctaatcctggcgacggacgaagaccgtgagggg
gaaagcattagctggcacctgctgcaactgctccagcccaaggtgcccacgaagcgcatg
gtgttccacgaaattaccgaggaagccatccgcgaggccctgcaaaactgccgcgatgtg
gatgagcaactggttcatgcccaggaaactcggcgcattctagatcggctagtgggctat
acgctgtcgcccttgctgtggaaaaaaattgcctggggtctatcggcagggcgagttcag
tcagttgcagtacggctattggtcaaccgcgaacggcagcgccgcgcttttcgcaagggg
tcttactgggatctgaaggcgacgctggagaaagacggcagcagctttgagtcgaaactg
gtgaccctgggtggccgccgcattgccacgggggcagattttgacgaatcgacgggacaa
atcatcgccggacgcgatgtgctgctgctgggtgaggcagaggcccaggcgttgcacgat
cgcctccagtcggcaacctggactgtcacaggactagaagagcggtcttcgacgcgcaag
ccctcgccgcccttcaccacctcgacgctgcaacaggaggccaaccgcaagctgcgcctg
tcggcccgtgatacgatgcgcgtggctcagagcctttatgaacagggctatatcacctac
atgcgaaccgactcggtgaacctgtcgcaacaggcgatcgccgccgctcgaagctgcgtt
cagcagatgtatggcagcgaatacctcagccccgaaccgcgtcgttattctactaagagc
aagggcgcacaggaagcccacgaagccatccgtcccgcaggcagcaccttccgcacgccc
caggaaacgggcctgagcgggcgcgagtttcagctttatgacctgatctggaagcgcacg
gtggccacccagatggcagaagtccgccagacgaatatcaccgtgcagatccaggcagaa
gatgcgggatttcgcgctacgggcaagcgcattgactttcccggctttttccgggcctac
gtggaagggtcggacgatcccgatgcggcaatcgaaaaccaggaagtgatcctgcctgtg
ctgcgggagggcgaccatccaaattgtcaggagctagaggcgatcgcccacgaaacccag
ccgcccgcccgctacaccgaagcgtccctagtgaaaacgctggaaagcgaaggcatcggt
cgccctagcacctatgccagcatcatcggcaccatcatcgaccggggctatgcccaaatg
gtgaacaacagtctcgtgcccactttcactgcctttgccgtcaccagcctgctcgaaaag
cactttcctgacctggtagacaccagctttaccgctcgcatggagcgcacactagacgac
atttccacaggcgaagccgactggctgccctatctccagcagttttacctgggtgaaacc
gggctagacgggcaggtgaagcagcgcgagagccagatcgaccctgccgaagcccgcagc
gtggatctggaggggctggatgccaaagtccgcattggccgctacggagcctatatcgaa
accgaaaccgaggaggggccggttaaagctaccattccccaagactttacgccgtctgac
ttggatgccgagcgggttgaggtgctgctgcgtcaaaaaaccgaagggccggacaagctt
gggtttcatcccgaaacgggcgaaccaatttacgtgctgatcggagcctacggcccctat
gtgcagcttggcgacgtaacggatgaaaaccccaagcccaagcgggcctcgctgcccaaa
ggcgtgcagccccaagatgtaacgttggagcaggcggtgaacctgctggcgctgccgcgt
ttactggggatgcacccggaaacgggctgcaagattcaggcgaacttgggtcgctttggg
ccctacatcgtccatgaccagggcaaaaacggcaaggactatcgctcgatcaaaggcgac
gacgacgtgctgacgattaccctagagcgggcgctagaactgctggcagagcctaaagcg
ggacgcggacgcggacgggccgcggctccgatccgagaattaggcccccacccggaagac
ggcgaacccgtgaacctctacaacggcccctacggcgtttacatcaagcacggcaaactc
aatgcctccctgcctgaaggcgaaaaagccgagtccatcagcatggaagcggccctgaaa
gcgctggcagaaaaagccgccaccaagaaaacctcgcgccgttccagcaaaactggcgac
gcaggcacgaagacttcggccaccaagacggcgaccaaaaccaccaaaacaacccgcgca
aaggctggcacggctaaatccagcacggctaaatccagcacaactaaggcggccgctgcg
aagaagacaaccaaatctgctaaatcgaccgctgaggccgaggctgaggtaacgccaacc
gaaccagcgcctgcccaaaaaacggcagcaaaatccacccctgcaaagtccacaacccaa
aaagcggcatccaccacgcgcagcactaagtctaccaaagcgtcctga
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