Thermoleptolyngbya oregonensis: HNI00_04370
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Entry
HNI00_04370 CDS
T09452
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tog
Thermoleptolyngbya oregonensis
Pathway
tog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HNI00_04370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tog03400
]
HNI00_04370
Enzymes [BR:
tog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HNI00_04370
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HNI00_04370
DNA repair and recombination proteins [BR:
tog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HNI00_04370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WOB42474
UniProt:
A0AA97BC17
LinkDB
All DBs
Position
1014352..1015200
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AA seq
282 aa
AA seq
DB search
MPELPEVETVRRGLNQTTLSQPIVGADVLLDRTIAHPASSPEFVAGLRGLAIAQWRRRGK
YLLAELVDAANQPAGYLGVHLRMTGQLLWVAQDAPLQKHCRVRLFFPENRELRFVDQRTF
GQLWWVPGDRPPESVITGLQALGPEPLSDDFSVDYFARWLRGRQRPIKNALLDQSLVAGI
GNIYADEALFLSGIRPQTLCARLKPKQIQRLHHAIRDVLQTAIANKGTTFSDFRDVQGIN
GNYGGVAWVYNRDGEPCRVCSAPILRLKMAGRSAHYCKACQR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaagtagagacagtccgccgagggctaaaccaaacgacgctgagc
cagcccattgtcggggcggatgtgctgctcgatcgcacgatcgcccatcccgcttcgtcc
cctgagttcgttgcagggctacgggggctggcgatcgcccagtggcggcggcgcggcaag
tatttgctggcggaactggtggacgcagccaaccagcccgctggctatctcggtgtgcat
ctgcggatgacggggcagttgctctgggtggcgcaggatgctccattgcaaaagcactgt
cgagtgcggctgttttttccagagaaccgagaactacggtttgtagatcagcgcaccttt
gggcaactgtggtgggttccgggcgatcgcccgccggaatccgtcatcaccggactgcaa
gcccttggcccagagccgctttccgacgatttttcagtagactattttgcccggtggcta
cgcggccgccagcgccctattaaaaacgccttactagaccaatccctcgtcgcaggcatt
ggcaacatctacgccgacgaggccctgtttctcagcggtattcgcccgcagaccctctgc
gcccgactgaagccgaagcaaattcagcggctccaccacgccattcgagacgtgctgcaa
acggcgatcgccaacaagggcaccacctttagcgactttcgtgacgtacagggcatcaat
ggcaactacggcggcgtggcctgggtttacaaccgcgacggcgaaccctgccgcgtatgc
agcgccccgatcctgcggctcaagatggccgggcgatcggcgcactattgcaaggcgtgt
cagcggtga
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