Thermoleptolyngbya oregonensis: HNI00_07150
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Entry
HNI00_07150 CDS
T09452
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tog
Thermoleptolyngbya oregonensis
Pathway
tog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HNI00_07150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tog03021
]
HNI00_07150
03400 DNA repair and recombination proteins [BR:
tog03400
]
HNI00_07150
Enzymes [BR:
tog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HNI00_07150
Transcription machinery [BR:
tog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HNI00_07150
DNA repair and recombination proteins [BR:
tog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HNI00_07150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WOB42952
UniProt:
A0AA96YMM0
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All DBs
Position
1656358..1657305
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AA seq
315 aa
AA seq
DB search
MAHFKVECIESETGKNQSLYSKFVLEPLERGQGTTVGNALRRVLLSNLEGAAVTAVRIAG
VTHEFMTVPGVKEDALDILLNMKEVVLKSYSSQPQIGRLRVEGPLDVTSAYFDLPSDVEV
VDETQHIATVSAGSVLEMEFKIEKGIGYRAIDRSRDDSSAVDYLQIDSIFMPVRKVNYTV
EDARVGGSLEKDRLIMEVWTNGSITPQDALSQAAGILVDLFTPLKDITIDDIGPIFSDDE
DPHNQILIEELNLSVRAYNCLKRAQINTVADLLEYSQEDLLEIKNFGAKSAEEVIEALQT
RMGITLPHEKPAKTG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcacatttcaaggttgagtgcatagagtccgaaacagggaaaaaccagagtctatac
agcaagtttgttcttgagcctttggagcggggtcagggtacgacggtcggaaatgcactc
cgacgtgtgctgctgtcgaacctagagggggctgcggttacggcagtccgaattgcaggg
gtgacgcatgagtttatgaccgtgccgggtgtgaaagaggatgccctcgacatcctgctg
aacatgaaggaagtcgtgctgaagagttactcttctcagccgcagattgggcggcttcgg
gtggagggcccgctggatgtcacctctgcttacttcgatcttccatctgatgtcgaagtg
gtggatgaaactcagcacatcgcgacggtttccgcaggttctgtgctggagatggagttc
aagatcgagaagggcatcggctatcgagccattgatcggagccgggatgactcttcggcg
gttgattatttgcaaatcgactcaattttcatgcctgtgcgtaaggtgaattacaccgtt
gaggatgcgcgggttggcgggtctctagaaaaagatcgcctgatcatggaagtgtggacg
aatggtagcatcactcctcaagatgctctgagtcaggctgccggtattctggtggatctg
tttaccccgctgaaggacatcacgattgatgacattgggcccatcttctcggatgatgaa
gatccccacaaccagatcttgattgaggaactgaatctttcggttcgcgcctacaactgt
ctgaaacgggcccagatcaatacggtggcggatttattggagtactcccaagaagatttg
ttagaaatcaaaaactttggtgcgaagtctgccgaagaggtgatcgaggcgcttcaaact
cgcatggggattaccctgccccatgaaaagcctgccaagactggttaa
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