Thermoleptolyngbya oregonensis: HNI00_08865
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Entry
HNI00_08865 CDS
T09452
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tog
Thermoleptolyngbya oregonensis
Pathway
tog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HNI00_08865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tog03021
]
HNI00_08865
03400 DNA repair and recombination proteins [BR:
tog03400
]
HNI00_08865
Enzymes [BR:
tog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HNI00_08865
Transcription machinery [BR:
tog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HNI00_08865
DNA repair and recombination proteins [BR:
tog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HNI00_08865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
ANM3_zf-C2H2
Motif
Other DBs
NCBI-ProteinID:
WOB43256
UniProt:
A0AA97BCX4
LinkDB
All DBs
Position
complement(2036009..2037883)
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AA seq
624 aa
AA seq
DB search
MPKIEQRFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKGI
PSYMAILLDMPLRDVEQIVYFNSYVVLSPGNAENLSYKQLLTEDQWIEIEDQLYSEDSQL
TGVEVGIGAEALQRLLEDLDLEKEAEQLREEIATAKGQKRAKLIKRLRVIDNFIATQSKP
EWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPKLKIHQCGLPKEMAIELFQPFVIHRLIRQGLVNNIKAAKKLIQRNDPQIWDVLEE
VIDGHPVLLNRAPTLHRLGIQAFEPILVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLSL
EAQAEARLLMLASNNILSPATGRPIVTPSQDMVLGCYYLTAENPNATKGKDRYFSSLEDV
IVAYEQQQVDLHAYVWVRFDGDVESPEPDNEPIEEQRSEDGIVTKLYKYRRVREDAEGNR
VSQYIRTTPGRIIYHKTIQEALVS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaatcgaacagcggtttgactacgtgaagattgggctggcctcgccagagcgg
attcgccagtggggagagcgcaccctgccaaacggacaggtcgtgggcgaggtcaccaag
ccggaaacgattaactaccgcaccctcaagccggaaatggacggcttgttctgcgaacgc
atttttggcccggccaaggattgggagtgtcactgcggcaaatataaacgggtgcgccac
cggggcatcgtctgcgagcgctgcggcgtggaggtgacggaatctcgcgtccgtcgccac
cgcatgggctacatcaagctagcggctcccgtggcccacgtttggtatctcaagggcatt
cccagctatatggcgattttgctcgacatgccgctacgagacgtagagcagattgtctac
ttcaactcctacgtggttctcagccccggcaacgccgaaaacctcagctacaagcaactc
ctgaccgaagaccagtggattgagatcgaagatcagctttacagcgaagattctcagctc
actggggttgaagtgggcattggtgcagaagcgctgcaacgactgctagaagacctggat
ttggagaaagaagctgagcaactccgggaggaaattgccactgctaaggggcaaaaacgc
gccaagctgatcaagcggctacgggtgatcgacaacttcatcgctacccagtccaagcca
gagtggatggtgctggatgtgattccggtgattccgccagatctgcgcccgatggtgcaa
ctggacggcggtcgctttgccacctccgacctgaatgatttgtatcgccgggtgatcaac
cggaacaaccgtctggctcggctccaggaaattctggctccggagatcatcgtccgtaac
gaaaagcggatgctgcaagaagccgtagacgcgctgatcgacaatggacggcgcggccgc
acggtggtcggagccaacaaccgcccgctcaagtctctgtcggacatcatcgaagggaaa
cagggtcgcttccgccaaaacctgctgggtaagcgggtagactactccggtcgttcggtt
attgtggtcggccccaagctcaagattcaccagtgcggtctgccaaaggaaatggccatc
gagctatttcagccctttgtgatccaccgcctgattcgtcagggcttggtgaacaatatc
aaagcggcgaagaagctgattcagcgcaacgatccccagatttgggacgtgctggaagag
gtcatcgacggccaccccgtgctgctaaaccgtgccccaacgctgcaccgtctggggatt
caggcctttgaacccattctggtagacggtcgagcaattcagcttcacccgctggtgtgt
ccggcctttaacgcagacttcgacggcgaccagatggcggttcacgtccccctctcgcta
gaagcccaggccgaagcgcgtctgctgatgctggcctcgaacaatatcctctccccagcc
acgggtcgcccgatcgtcacccccagccaggacatggtgttgggctgctactatctgacc
gcagaaaaccccaatgctactaagggcaaggatcgctacttctctagcctggaagacgtg
atcgttgcctatgagcagcagcaggttgatttgcacgcctacgtttgggtgcggtttgac
ggcgatgtggagtcgccagagccggacaacgagccgattgaggaacagcgctccgaagac
ggcattgtcacgaagctctataagtatcgccgcgtccgggaagatgccgagggcaaccgg
gtgtctcaatatattcgcacgaccccgggccgcattatctaccacaagacgatccaggaa
gcgctcgtcagctag
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