Thermoleptolyngbya oregonensis: HNI00_09210
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Entry
HNI00_09210 CDS
T09452
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tog
Thermoleptolyngbya oregonensis
Pathway
tog03030
DNA replication
tog03430
Mismatch repair
tog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNI00_09210
03430 Mismatch repair
HNI00_09210
03440 Homologous recombination
HNI00_09210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tog03032
]
HNI00_09210
03400 DNA repair and recombination proteins [BR:
tog03400
]
HNI00_09210
Enzymes [BR:
tog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNI00_09210
DNA replication proteins [BR:
tog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HNI00_09210
DNA repair and recombination proteins [BR:
tog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HNI00_09210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WOB43317
UniProt:
A0AA97BLM1
LinkDB
All DBs
Position
2124441..2127968
Genome browser
AA seq
1175 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQLDQLIDRAIELGMPAIAITDHGVMYGAIEILKVCKKRDNA
VKPIIGNEMYVINGDITKQERRPRYHQVVLAKNTQGYKNLVKLTTISHLQGVQGKGIFSR
PCVNKELLEQYKDGLIVTSACLGGEVPQAIMQGRPDVARRVAQWYKDVFGDDYYLEIQDH
GLQEERIVNPEIVRIARELDIKLVCTNDSHYISCYDVEAHDALLCIQTGKSIVEEKRLRY
TGTEYLKSADEMRLLFRDHLPPDVVEEAIAHTLEVAEKVEGYKILGEPRIPNYPVPDGYT
PATYLEETSRAGLAKRLKVATYREVPPDYQERLEYELQMMHQMGFDGYFLVVWDYIKFAR
DHGIPVGPGRGSAAGSLVAYSLGITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIERRG
EVIQYVTEKYGTDRVAQIITYNRMTSKAVLKDVARVLDIPYGESDKMAKMIPVVRGKPTK
LKVMISDETPTPEFKEKYDSDAVVPGSDPPVTYRRWIDMAMRIEGTNKSTGVHAAGVVIS
AEPLDEVVPLERSKEGGVTTQYPMEDIELLGLLKMDFLGLKNLTMIQKAVDLISKTHGIQ
VDLDNLPMEDPATYQLLARGELEGIFQLESSGMRQIVRDLKPSGLEDISSVLALYRPGPL
DAGLIPKFINRKHGRERIEYEHELLTTILNETYGIMVYQEQIMKIAQDMGGYSLGQADLL
RRAMGKKKKEEMEKHQSIFTEGAEKNGVPKKVAADLFDQMVKFAEYCFNKSHSTAYGYVT
FQTAYLKANYPVEYMAALLTANSDDQDKVQKYISSCTMMGITVEPPDINRSGVDFTPLER
SILFGLSAVRNVGAGAIENILQAREADGPFKSLGDLCSRIDPRTVNRRALEALIQCGAMD
CIETNRRQLMNDLDLVLEWAQSRAKDRAIGQGNLFDMLGSVSEAPGSFESAPKAPAVEDF
PQQERLKLEKELLGFYVSDHPLKNIREAARILAPINLSSLEEQPEGSSISAIAMLTGVKP
VVTKKGDRMAIIQLEDLTGHSEAVVFPRTYERIGSLIVQEARLMIWGKVDKRDERSQLIV
EDAEPVEDVQLVMVELDAQIAGDIVQQNTLREVILKNRGDEDQCKTPVVAIVAGAHRREL
VRLGNQFRVQDYRAAVTALNRAGFRARSTALTSAS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgtcggtctgcatattcacagcgactatagcctgctagacggcgcgagtcag
cttgaccagctcatcgaccgggcgatcgagctaggaatgccagcgatcgccattacggat
cacggcgtgatgtacggcgcgatcgagatcctcaaggtatgcaaaaagcgcgacaacgcc
gtcaagcccatcatcggcaacgagatgtatgtgatcaacggcgacatcaccaagcaggag
cgtcgcccccgctatcaccaggttgttcttgccaaaaacacgcagggctacaagaatctc
gtcaagctgaccaccatttctcacctccagggtgtgcaggggaagggcattttttcgcgc
ccctgtgtcaacaaagaactgctggagcagtacaaagatgggctgatcgtcaccagcgcc
tgtctcggcggcgaagtgccccaggcgattatgcagggccgtccggatgtggcgcggcgc
gttgcccagtggtacaaggacgtgtttggcgacgattactatctggaaattcaagaccac
gggctgcaagaagagcgcatcgtcaaccccgaaatcgtccgcattgcccgcgagctagac
atcaagctggtctgcaccaacgattcgcactatatttcctgctacgacgtggaagcccac
gacgcgctgctctgcatccaaacgggcaaatccatcgtggaagagaagcggctgcgctac
acgggcacggagtatttgaaatccgccgatgagatgcggcttttgttccgcgatcacctg
ccgccggatgtggtggaagaggcgatcgcccatacgctagaagtcgccgaaaaggtcgaa
ggctacaaaattctgggtgaaccgcgcattcccaactaccccgtgcccgacggttacacg
cctgccacttacctcgaagaaacctcccgcgctggattagccaagcgccttaaagtcgct
acctaccgtgaagtccccccagactatcaagagcggctggaatacgagctgcaaatgatg
caccagatgggcttcgacggctactttctggtggtgtgggactacatcaagtttgcgcga
gatcatggcattcccgtggggccagggcgcgggtcggcggcggggtcgctggtggcctac
tcgctgggcatcaccaatatcgatccggtgcatcacggcttgctgttcgagcggttcctg
aaccctgagcgcaagtccatgcccgatatcgacacagacttctgcatcgaacgtcggggc
gaggtgattcagtacgtcaccgaaaagtatggcaccgaccgggtggcgcagatcatcacc
tacaaccgcatgacctccaaagccgtcctcaaggatgtggcgcgggtgctggatattccc
tatggggaatccgacaagatggcgaagatgattcccgtcgtgcgcggcaagcccaccaag
ctcaaggtcatgatttccgacgaaacgcccacgccggaattcaaagagaaatacgacagc
gatgccgttgtgcctggcagcgatccgcccgtcacctaccgccgctggattgacatggcc
atgcggatcgagggcaccaacaaatcaaccggcgttcatgcggcgggcgtggtgatttcg
gcagaaccgctggacgaagtggtgccgctggaacgcagcaaggaaggcggtgtgacgacg
caatacccgatggaggacatcgaactgctgggcctgctgaagatggacttcctggggcta
aagaacctgacgatgattcagaaagcggtggatctcatcagcaagacccacggcattcag
gttgatttggacaatttgccgatggaagatccggccacctatcaactgctggcgcggggc
gaactggagggcatcttccagctagaatcctccgggatgcggcagattgtgcgcgatctg
aagccgtcgggactggaggatatttcctcggtgctggcgctgtatcgtcccgggcctctg
gatgcagggctaattcccaagtttatcaaccgcaagcacggtcgcgaacggatcgaatat
gaacacgagctgctcaccaccattctgaatgagacttacggcatcatggtctaccaggag
cagatcatgaaaatcgcccaggacatggggggctattcgctggggcaagccgacctgctg
cggcgggcgatgggcaaaaagaaaaaagaggagatggagaagcatcagagcatcttcact
gaaggcgcagaaaagaacggcgtgcccaagaaggtggcggcggatttgtttgaccagatg
gtgaagtttgcggagtactgctttaacaagtcgcactctacggcctacggctacgtcaca
tttcaaacggcgtatctaaaagccaattaccccgtggaatacatggcggcgctgctgacg
gccaacagcgacgaccaggacaaagtgcagaaatatatctcctcctgcacgatgatgggc
attacggtggagccgccggacatcaaccgatcgggagtagactttacgccgctggagcgc
agcattttgtttgggctgtcggcggtgcgaaacgtcggcgcaggcgcgatcgagaatatt
ttgcaggcgcgagaggccgatggccccttcaagtctctgggcgatctgtgcagccgcatc
gacccgcgcacggtgaaccggcgagcgctggaggcgctgatccagtgtggggcgatggac
tgcatcgagacgaatcgacggcagttgatgaatgatctggatttggtgctggagtgggcg
cagtcgcgggcgaaggatcgggcaattgggcaggggaacctgtttgatatgctgggcagc
gtcagcgaagcgccggggagcttcgagtctgcgcccaaggctcccgccgtagaggacttt
ccgcagcaggagcggctaaagctagaaaaggaactgctgggcttctatgtgtcggatcat
cccctgaaaaatattcgagaagccgccagaatcctggctccaattaacctgagtagcttg
gaagagcagccggagggcagcagcattagcgcgatcgccatgctgacgggggtcaagcct
gtggtgacgaaaaagggcgatcgcatggccatcatccagcttgaagacctgacggggcac
tccgaagccgtcgtctttccgcgcacctatgagcgcatcggcagcctcatcgtgcaggag
gcgcggctgatgatctggggcaaggtggacaagcgcgacgagcgcagccaactgattgtc
gaggacgccgaacccgtggaggacgtgcagttggtgatggtagagctagacgcacagatt
gcaggcgacattgtgcagcaaaacaccctgcgcgaggtcattctcaaaaaccggggcgac
gaagaccagtgcaaaacgcccgtcgtggcgatcgtcgctggggcgcatcgtcgggaactg
gtgcgtctgggcaatcagttccgcgtgcaggattatcgggccgctgtaaccgcgctgaac
cgagccggattccgcgcccgctcgaccgcgttgaccagtgcttcttga
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integrated database retrieval system
