Thermoleptolyngbya oregonensis: HNI00_13500
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Entry
HNI00_13500 CDS
T09452
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tog
Thermoleptolyngbya oregonensis
Pathway
tog03410
Base excision repair
tog03430
Mismatch repair
tog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HNI00_13500 (recJ)
03430 Mismatch repair
HNI00_13500 (recJ)
03440 Homologous recombination
HNI00_13500 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tog03400
]
HNI00_13500 (recJ)
DNA repair and recombination proteins [BR:
tog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HNI00_13500 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HNI00_13500 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HNI00_13500 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
WOB44051
UniProt:
A0AA97BDC2
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All DBs
Position
3173949..3176324
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AA seq
791 aa
AA seq
DB search
MAESAIWQLPPDESPSAEFVQAAAEYAPAGMATYAAQLLWQRGIRDPAALAGWLDPDCYL
PTSPFAFGEEMQRAIARLKLAYERQEAIAIWGDFDADGITATAVLWDGLGQFFPQGDRLS
YVIPNRLTESHGLTQRGIERLAAAGVRLIVTCDTGSTSLAEIDHANRLGLDVIVTDHHTL
LAQRPPVVAIVNPRSLPADHPLATLSGVAVAYKLVEALYETLPDVPTRPLDTLLDLVAIG
LIADLVELRGDCRYLAQRGIAQLQKNQDVATAPRPGVAMLLEFCKRAGDRPTDISFGLGP
RINAISRIQGEARDGVELLTSRDESRCRQLAEAAELANTRRRALQQDLSKQVSARLSQMD
LSTTGVIVLEDPQWPVGVLGLVAGQIAQDYGRPTILLSSAAPLAAAKPAASDAASSLPGR
VKLARGSARSVNSIDLYELMSSQQHLLSGFGGHPLAAGLSLPVENIPLFADGINRQLRQQ
VGISGAIAPLLLPVDLIVTVGQLGKDLFQTLKLLEPCGMGNPTPHLLIRRGRFENVRNEN
IRDFKQRKVRYIKTEFDLVDETGQFHGVWWGHYRDEMPPGLCDAVVQLDFNPFRKRYEVR
LVAVRPAADEWATAGPAEPDWLLDWRGQTELPAGAADAEKVLVMTDCPTQWDDLRVWGRQ
ARHDGKRLAIAYQTPPAIDPLESWQTLVGLAKYLSRTGQVATRSQLLRKLGLGDRPLRAG
IQALQALGMTVTALPDGLQFQWHPADLSTQSPTAAQVNQAIEAFLSAVEEEQFRRQYFAT
VPAATIRAIAS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtcggcaatttggcagcttccacccgacgagtcgccgtccgccgagtttgtg
caggcagcggccgagtatgcacccgctggaatggcgacttatgctgctcagttgctctgg
cagcgcggcattcgcgacccagcggcgctagcgggctggctcgaccccgattgctacttg
ccgaccagcccctttgcgtttggcgaagaaatgcagagggcgatcgcccgtctgaagctg
gcctacgaacggcaggaggcgatcgccatctggggagattttgatgccgatgggattacg
gcgacggcggtgctgtgggacgggctggggcagttttttccccagggcgatcgcctctcc
tacgtcatccccaatcgcctcacggaatcccacgggctgactcagcgtggcatcgagcgt
ctggcggcggcgggcgttcgcctgatcgtcacctgcgacacgggcagcaccagtctggcg
gagatcgaccatgcgaatcgcttggggctggacgtgattgtgacggatcaccatacgctg
ctggcccagcgtccgcctgtggtcgccattgtcaatccccgcagcctgcctgcggatcat
cccctcgccaccctgtcgggcgttgccgttgcctacaaactggtggaggcgctgtacgaa
accctgcccgacgtgccgacgcgcccgctggatactctgctggatctggtggcgatcggg
ctaattgctgacctggtggaactgcggggcgactgccgctatctggcgcagcggggtatt
gctcagcttcagaaaaatcaggacgtggcgacggccccgcgccccggcgtggcgatgctg
ctggaattttgcaaacgggcgggcgatcgccctaccgatatttccttcgggttggggccg
cgcatcaacgccatcagccgcatccagggcgaagcccgcgatggcgtggagctattgacc
agccgcgacgagagccgctgtcgccagcttgccgaagcagcagaactggcaaacactcgc
cgccgcgccctccagcaagatctgtccaaacaagtctcggcgcggctgagccagatggat
ttgtctacgactggtgtgattgtgctggaagatccgcagtggccagtgggcgttttggga
ctggtggcggggcaaattgctcaggactatggccgcccaactattttgctcagcagcgcc
gcaccgctggcggctgccaaacctgctgcatcggatgccgccagttccttgcccggtcgc
gtcaagctggcgcgaggctctgcccgttctgtgaactcgattgatctctacgaattgatg
agcagtcagcagcacttgctcagcgggtttggcgggcatcccctagcggcggggctgagt
ttgcctgtggaaaacattccgctgtttgcggatggcatcaatcggcaactccggcagcag
gtggggatatcgggggcgattgccccgctgttgctcccggtcgatctgatcgtgaccgtg
ggccagttgggaaaagacttgttccaaacgctgaaactgctggaaccctgcggcatgggc
aaccccacgccccacctgctgattcgtcggggtcgctttgaaaatgtccgcaatgaaaat
atccgcgacttcaagcagcgcaaggtgcggtacatcaaaactgagtttgaccttgtggat
gaaaccgggcaatttcacggcgtgtggtggggtcactatcgcgacgagatgccgccgggg
ctgtgcgatgcggtggtgcagctggatttcaatccgtttcgcaagcgctatgaggtgcgg
ctggtggctgtccgtccggcggcggacgagtgggctacggcggggcctgctgaaccggac
tggctgctggactggcgcgggcagaccgaacttccggcaggcgcggccgacgcagaaaag
gtgctggtgatgaccgactgcccgacccagtgggacgatttgcgcgtgtgggggcgacag
gcccggcacgacggcaaacggctggcgatcgcctatcaaactccacccgctatcgatccg
ctagaatcctggcaaaccctggtgggactggcaaagtatcttagccgcacagggcaagtc
gcaacgcgatcgcagcttttacgaaaactggggctgggcgatcgcccgctgagagccgga
attcaggcattgcaggcgctgggaatgacggtcacagccctacccgacgggctgcaattt
cagtggcatccagccgatttgtctacacagtcaccaacagccgcccaggtgaatcaggcc
attgaggcgtttctctcggcggttgaagaagaacaatttcggcgacagtactttgcgact
gtgcctgctgcaacgattcgggcgatcgcctcttaa
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