Thermoleptolyngbya oregonensis: HNI00_13985
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Entry
HNI00_13985 CDS
T09452
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tog
Thermoleptolyngbya oregonensis
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tog03016
]
HNI00_13985
Enzymes [BR:
tog01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HNI00_13985
Transfer RNA biogenesis [BR:
tog03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HNI00_13985
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DUF2730
DNA_pol_B_2
Motif
Other DBs
NCBI-ProteinID:
WOB44139
UniProt:
A0AA97BDB3
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All DBs
Position
3302141..3302770
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AA seq
209 aa
AA seq
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MALDEFQVFDEDLSAEALADYMTVEAIAVDTETMGLRPWRDRLCVVQLCDPAGRVSVVRI
LRGQTAAPHLQQLLEAPQITKVFHFARFDMAAFQYHLNIAVRPVFCTKIASKLARTYAPR
HGLKEVVQELEQVELDKTAQSSDWGNALNLSEEQLRYAANDVRFLLSIRQKLAEMLQREE
RLALAESCFQCLPTFVDLDLLHYENIFEH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcattagacgaatttcaggtgtttgatgaggatctgtcggctgaagcgctggcagat
tatatgactgtagaggcgatcgccgttgacacggagacaatggggctgcggccctggcgc
gatcgcctttgtgtggtgcagctttgcgatcctgcggggcgcgtgtccgtcgttcgcatc
ctgcggggacaaaccgccgccccccacctccagcagttgctagaagcgccgcaaattacc
aaagtctttcactttgcccgcttcgacatggcggcgtttcagtaccatctcaacattgcg
gttcgtccagttttttgcaccaaaattgccagcaagctggcccgcacctacgccccccgc
cacggactcaaggaggtggtgcaggagctagagcaggtggaactggacaaaaccgcccaa
agctctgactggggcaacgcgctaaacctgtcggaggagcaactccgctacgccgccaat
gacgtgcggtttttgctcagcatccgccaaaagctggcggagatgctccagcgcgaagag
cggctagcgttggcagaatcctgctttcagtgtctccccaccttcgtggatctggatttg
ctgcactacgagaacatttttgagcattaa
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