Thermoleptolyngbya oregonensis: HNI00_17940
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Entry
HNI00_17940 CDS
T09452
Name
(GenBank) cadherin-like domain-containing protein
Organism
tog
Thermoleptolyngbya oregonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_5
Cadherin_4
Big_9
CshA_repeat
Big_11
DUF4347
HU-CCDC81_bac_2
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
WOB44822
UniProt:
A0AA96Y4U3
LinkDB
All DBs
Position
4266573..4272527
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AA seq
1984 aa
AA seq
DB search
MSLLLVDSAVENVQQLLQNTSKHIKVAIIDRTQNGVETLIQWLQRFPRLQQVHILAHGAP
GRIFLGNTQLSQDTLQPYQAALRYIRQRRKISQAPLNLLLYSCNVAAGEVGTAFVESLHR
LTGANIAASSGPVGNAALGGTWHLDTQTSAFPIALPFAAAATHRYPGLLAPLSISGIIAN
YVDLPDNASIYTANEVGNPDGDGTANELYTYNFPVGTNNNLVISGFTAASSTYNLAQLVD
QVRLRRIPNPSVSNAEGRQVFWYEIQNLNSTGNVLNLRPSRINTMEEALLGNVINRGVDN
VFANQGDNNINNIERIDFIASGGLTAPTAANLNDIGFLLLERGGNDPLTIAAITAVDASG
NPTAYGPLQVVPAGAWGASGFNLATAVLNDMGAGGNPRFSSNIAAQNIGGVFLSYSSLGI
GAGQTFFGYSVFPNDVGTDLVNLTDAALNSSSASGQGGLDLVAGGGIFVRSGSNLAPTLN
LDPFNITGGPNDFNFQATFTGSAVAITAPNASGFDPNNSGADIETLTISVNAPNGNSEAL
IIGGTPFILGTANSGTVTIGSTTFAVSVAVSGTTATLTITRNGGGDLSNAAVSALLQSLQ
YNNTAPSPNATPRVFSFVANDGTLNSNTVTSTIGINVPSVNSPPVDGDETLSVAEDNPLT
GNLLSNATDVDGDTLSITQFTIGSTTYTAGDTANIPGVGTLTINANGTFTFTPAPNYNGP
VPPVTYTVSDGNGGTDTSTLSITVTPVNDPPIDGNETLSVAEDNPLSGNLLSNATDVDGD
TLSITQFTIGSTTYTAGDTANIPGVGTLTINANGTFTFTPAPNYNGPVPPVSYAVSDGNG
GTDTSTLSITVTPVNDPPIDGNETLSVAEDTPLSGNLLSNATDVDGDTLSITQFTIGSTT
YTAGDTANIPGVGTLTINANGTFTFTPAPNYNGPVPPVSYVVSDGNGGTDTSTLSITVTP
VNDPPIDGDENLSVAEDNPLSGNLLSNATDVDGDTLSITQFTIGTDTYTAGQTATIPGVG
TLIINTNGTFTFTPAPNYNGPVPPVTYTVSDGNGGTDTSTLSITVTPVNDPPIDGNENLS
VAEDNPLSGNLLSNATDADNDPLSITQFTIGTDTYTAGQTATIPGVGTLIINTNGTFTFT
PAPNYNGPVPPVTYTVSDGNGGTDTSTLSITVTPVNDPPIDGDETLSVAEDNPLTGNLLS
NATDADNDPLSITQFTIGSTTYTAGDTATIPGVGTLTINANGTFTFTPAPNYNGPVPTVS
YVVSDGNGGTDTSTLSITVTPVNNPPTDGNETLSVAEDTPLSGNLLSNATDVDGDTLSIT
QFTIGSTTYTAGDTATIPGVGTLIINANGTFTFTPAPNYNGPVPTVSYVVSDGNGGTDTS
TLSITVTPVNDPPIDGDETLSVAKNTPLSGNLLDNATDADGDALSVIEFTIDGDTYYSAG
DTATIPGIGTLTINTDGTFTFIPVTGYVGPVPPVIYTVMDSSETTDVSTLSITVIPANSA
PIDGNETLSVARDNPLSGNLLSNATDADGDTLSITEFTIGTTKFTAGQTANLPGIGTLTI
NANGTFTFTPATGYTGPVPPVAYTVSDGNGGTDTSTLSITVTGTDGNPALTIDLDADDSS
GVSGRDYQTRFVQGFPAPIADIDLTINSPGSTILQQAVITLVNRPNGTLESLSIRGALPP
GITASAYNPATGQLILSGAASLADYKRAIATITYNNSARSVDTTNRTITVVVSNGTLTSP
PATTTIEIASQNIINGSSGSDIIIGTDGDDILNGFSDRDIIYGRGGNDIINGGSDPDVLR
GDEGDDILNGGTGNDDLDGGDGNDIINGGGGNDLIHGRAGDDLLNGGRGRDRIFGGTGRD
TLNGGGGNDLLVGDEGDDVINGGRGNDRIIGGAGRDRLTGGQGNDLFIYRSKSEFGDIIT
DFEIVRDRIDLRAIFRGRGSMSNIRLRQVGADTQVDVKIGGQFATLGVLEAVNANTLQAR
HFIF
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttctcctggtggactcagcggtcgaaaacgtccagcaacttcttcaaaacacc
agcaagcacattaaagttgcaatcattgaccgtactcaaaatggggtcgaaaccctcatt
cagtggctacagcggttcccccgcctccagcaggttcatatcctggcccacggcgcaccc
ggtcgcatctttttaggaaatactcaactcagccaggataccctccagccttaccaggca
gccctgcgctatatccgtcagcgccggaaaatctcccaagctcctctaaacttgttgctc
tacagttgcaacgtggctgcgggtgaagtgggcaccgccttcgtcgaaagcctccatcgc
ctcacgggggccaacatcgcggcatcctcaggtcccgtgggcaatgcggcccttggtggc
acttggcatctcgatacccaaacgagcgctttcccgatcgccctgccctttgcggcggca
gccacccatcgctatccgggtcttctggctcccctgagcatcagcggcatcatcgccaac
tacgtagacctcccggacaacgccagcatctacactgccaacgaagtcggcaaccctgat
ggcgacggcactgccaacgaactctacacctacaactttccagtcggcaccaacaacaat
ctcgtcatttctggcttcaccgctgcatcctccacctacaaccttgcccagcttgtcgat
caggtcaggctccggcgtatccccaatccaagtgtctccaacgctgagggtcgtcaggtc
ttttggtacgaaatacaaaaccttaattcaactggcaacgtcctcaacctgaggccgtct
cgaatcaacacgatggaggaggcgctcctgggcaatgttatcaatcgaggggttgataac
gtttttgccaatcagggcgacaacaacatcaataacatcgaacggatcgatttcatcgcc
agcggtggcctcacggctcccaccgccgccaacctcaacgacatcggcttccttttgcta
gagcgaggcggcaacgacccactgacgattgctgcaattacagccgtagatgctagcggc
aatccaactgcctacgggcccctacaggttgtgcccgcaggggcctggggggcctcaggc
ttcaacctggccactgccgtgctgaatgacatgggagcagggggcaatcctcgtttcagt
tctaatatcgctgctcaaaatattggcggggtcttcctgagctattcgtccctgggtatt
ggcgcagggcagaccttctttggctactccgtcttccccaatgatgtgggtacggactta
gtgaacttgacggatgcagccctgaacagttctagtgcctcaggacaagggggcctggat
ctggtggcaggcggcggcatctttgtgaggagtggtagcaatttggctcctacccttaac
ctcgaccccttcaatatcacgggtggcccgaatgatttcaactttcaggcgaccttcaca
ggcagtgcagttgccatcacagcgccgaatgcctccggcttcgaccccaacaacagcggc
gcagatatcgaaacgctcaccatctctgtcaacgctcccaatggcaacagcgaagccctc
attatcggcggcacgcctttcatcctgggaactgctaacagtggaaccgtgacgatcggc
tccacgacctttgcagtcagcgttgctgtgtctgggacaactgccaccctcacaattacc
cggaacggcggcggcgacctttccaacgcagccgtaagcgccctactgcaatccctccaa
tacaacaacacagctccgtcccccaacgcaacgcctcgtgttttctccttcgtcgccaac
gacggcacgctaaacagcaacacggttacttccaccatcggcatcaacgttccttcggtt
aacagtcctcccgtagacggcgacgaaacccttagcgtcgcagaagacaacccgttaact
gggaacctgctgagcaacgcgacggatgtggacggcgacaccctcagcatcacccagttc
accatcggcagtaccacctacaccgccggggacaccgccaacattcctggcgtagggacg
ctgaccatcaacgccaatggcacgttcaccttcaccccagcgccaaactacaacggcccc
gtgccgcctgtgacttacaccgtcagcgatggcaacggcggaacagacacctcaacactg
agcatcacagtcacaccagtcaacgatccacccatcgatggcaacgaaactcttagcgtt
gcagaagacaacccgctgagtggcaatttgctgtcgaatgcgacggatgtggacggcgac
accctcagcatcacccagttcaccatcggcagtaccacctacaccgccggggacaccgcc
aacattcctggcgtagggacgctgaccatcaacgccaatggcacgttcaccttcacccca
gcaccaaactacaacggccccgtgccgcctgtgagctacgccgtcagcgatggcaacggc
gggacagacacttcaacgctgagcatcacggtcacgccagtcaacgatccacccatcgat
ggcaacgaaactcttagcgttgcagaagacactccgctgagtggcaatttgctgtcgaat
gcgacggatgtggacggcgacaccctcagcatcacccagttcaccatcggcagcaccacc
tacaccgccggggacactgccaacattcctggcgtagggacgctgaccatcaacgccaat
ggcacgttcaccttcaccccagcaccaaactacaacggccccgtgccgcctgtgagctat
gtggtcagcgatggcaacggcgggacagacacttcaacgctgagcatcacggtcacacca
gttaatgatccaccgattgacggcgatgagaacctcagcgttgcagaagacaacccgctg
agcggtaatttgctgagcaacgcgacagatgtggatggcgacaccctcagcatcacccag
ttcaccatcggtacagatacctatacggctgggcaaacggccaccattcccggtgtgggc
acgctgattatcaacactaatggcacgtttacctttaccccagcgccaaactacaacggc
cccgtgccgcctgtgacttacaccgtcagcgatggcaacggcgggacagacacttcaacg
ctgagcatcacggtcacgccagtcaacgatccacccattgatggcaatgagaacctcagc
gttgcagaagacaacccgctgagcggcaatttgctgagcaacgcgacggatgccgataac
gatccgcttagcatcacccagttcaccatcggtacagatacctatacggctgggcaaacg
gccaccattcctggcgtagggacgctgattatcaacaccaatggcacgttcaccttcact
ccagcgccaaactacaacggccccgtgccgcctgtgacttacaccgtcagcgatggcaac
ggggggacagacacttcaacgctgagcattaccgttactccagtcaacgatccaccgatt
gatggagacgaaactcttagcgttgcagaagacaacccgctaactgggaacctgctgagc
aacgcgacggatgccgataacgatccgcttagcatcacccagttcaccatcggcagcacc
acctacaccgctggagacaccgccaccattcctggcgtagggacgctgaccatcaacgcc
aatggcacgtttaccttcaccccagcgccaaactacaacggccccgtgccgactgtgagc
tatgtggtcagcgatggtaacggggggacagacacctcaacgctgagcattaccgttact
ccagtcaacaatccaccgactgacggcaacgaaactcttagcgttgcagaagacactccg
ctgagtggcaatttgctgtcgaatgcgacggatgtagatggcgacacccttagcatcacc
cagttcaccatcggcagcaccacctacaccgccggggacaccgccaccattcctggcgta
gggacgctgattatcaacgccaatggcacgtttaccttcaccccagcgccaaactacaac
ggccccgtgccgactgtgagctatgtggtcagcgatggtaacggggggacagacacctca
acgctgagcatcacggtcacgccggttaacgatccacccatcgatggtgacgagactctc
agcgttgccaaaaataccccgctaagtggcaatttgctagacaacgcaacagatgcagat
ggtgatgcacttagcgttatcgagttcacaattgacggtgatacttattacagtgcaggc
gatactgccacaattccgggcattggcacactgaccattaacacagacggtacgttcacg
tttattccggttacgggctatgttgggccggtgccgcctgtgatttacaccgtcatggat
agtagcgagacgacggatgtatctacgctcagcatcacagttattcctgccaatagcgcc
cctattgatggcaatgagaccctcagtgtggcaagagacaatccgctgagcggcaatcta
ctgagtaatgcgacagatgccgatggcgacacgctcagcatcaccgagttcaccattggc
acaaccaagttcactgctggacaaacggccaacctgccggggattggcacgctgactatt
aacgcgaacggcacgtttacgtttactccagcgacgggatatacagggccagtgccgcct
gtggcttacaccgtcagcgatggcaacggtggcactgacacctcgacactgagcattaca
gtcacagggacggatggaaatcctgcgcttacgattgatttggatgcagacgatagtagt
ggtgtttctgggcgggattatcagacccgctttgtgcaaggatttccagcgccgattgct
gatattgacctgacgattaacagccctggcagcacgattcttcagcaggctgtgattaca
ttggtcaatcgaccgaatggtactttagagagccttagcattcggggtgccctgccgccg
gggattaccgcctctgcctacaaccctgcgacgggtcagctaattttgagcggtgcggca
tctctggcagactataagcgggcgatcgccaccatcacctacaacaactccgctcgctct
gtagatactaccaatcgcaccatcacggtggtcgtcagcaatggcacgctgaccagcccg
cctgcgacaaccacgattgaaattgcgtcccagaacatcatcaacggctcctcagggtca
gacatcatcatcggaaccgacggggatgatatcttaaacggatttagcgatcgagacatt
atctacggtcgaggcggcaacgacatcatcaacggcggcagcgatcctgatgttctgcga
ggggatgaaggcgacgatatcctcaacggcggcactggaaacgatgacctagacggcggg
gatgggaatgacatcatcaatggcggcggcggcaacgacctgatccacggtcgagcaggc
gatgacctcctcaacggggggcgcggtcgagatcggatttttggcggcacgggtcgggat
acgctaaacggcggcggtggcaacgatttgctagtaggtgacgaaggcgacgacgtgatt
aacgggggccgcggcaacgaccggatcatcggcggtgcaggacgcgatcgcctcaccggt
ggacaaggcaatgacctctttatctatcgctcgaagtctgaatttggcgatatcattacg
gactttgagatcgtgcgcgatcgcatcgacctgcgagccatcttccgaggtcgtggctcc
atgagtaacatccgtctccgtcaggtgggtgcagatactcaagtggatgtcaaaattggg
ggtcagtttgcgaccctgggcgtgctagaagccgtaaatgcaaacaccctgcaagctcgt
cactttattttctag
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