Thermoleptolyngbya oregonensis: HNI00_20400
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Entry
HNI00_20400 CDS
T09452
Name
(GenBank) PAS domain S-box protein
Organism
tog
Thermoleptolyngbya oregonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_9
PAS
PAS_4
PAS_8
HATPase_c
Response_reg
HisKA
PAS_11
GAF
GAF_2
GAF_3
PAS_7
AlkA_N
L1R_F9L
Motif
Other DBs
NCBI-ProteinID:
WOB45234
UniProt:
A0AA97BE43
LinkDB
All DBs
Position
complement(4893646..4899966)
Genome browser
AA seq
2106 aa
AA seq
DB search
MFMHLFKNRASDQQAETQACCESVFREVFQANPAASLLLSFPEGRILEINEAFCELVGWS
ASEMAGRPIAKTGIWAEEGSYARLVQQIQTEGTVSAIADVFCTRAGSRRPVLLSARAVSF
GNEPSLWITAIAQPTEPVESSQPAPPHLASQILDQAAASIGQIRLYPDRRWQYDYCSAGC
ERVFGFTNAELMDGAWLERVLPEDRETVLSQEVEAILAGRSHRMEYRFLHKDGTLRWMAS
HLSPRWDAAENCWRVTFVDTDITEQKRLEAELRNIATALRQSEERFHQIANSIKQFILIR
DAQSGRCLYASPGYEAIWGRSCESLYQDRDSWIEAVHPEDRLDVEEVVQRQFQGDRIHHE
YRIFRPDGTLRWVQAEVFPVLDETGAFTRCAGIIEDITERKQLEAERRAAEESLRQSEER
FQQIANHVNQLFLVCDAKTGEYLYISPAYERIWGRSCESLYRNPQSWLEAVHPGDRPTVL
ASIASQRQGETTHREYRIVRPDGSIRWVRADVFPVRDEAGSIIRFVGFAEDFTERKRAEL
ARDLAEAALRDSEKRYASFFRCSPAAIVVSCLPTGQYIEVNPAFEQYTGYTRDEVIGRTA
VELDLWVDLPQREQLLQQVQTQGGAAEIEFQLRCKDGEVRTVLITAERYEIDGYEYLMTV
GVDVTDRKRVEAALQASEQHRRQALELSQTGSWAFDLGTGEAIWSDSHFRLMGLRPGEYP
SNYYTWRDRVHPEDLEWVEQALQQALEQHTLLEVEYRVVHPDGTERWMLTKGQGIYDESG
QPLRMTGVMIDISDRKAAELALQQKVQREQALNRVIQAIRRSLDLDAIFSTATQEITQLL
GADQANVIQLFSERGHWQIVASHRAHPDLPDVKGLQIPDADNPIAARLRHMEIVKIDDAS
LLEDDVNRQLAELFPGSWLIAPMAIDGRVWGCLAVTKNPKTVWTEEQCSLIQALVDQLAI
AIQQAALYQRLQESEASLKDVLNNAIAAVCSFRVFSNHDWVYDYYSTGSRAVYGYAPEEL
MADKHLWMSRVHPDDLETVILPLYDVIFREGTCTYEYRFYCKDGSLRWHLSTLTSRRDAI
ADSWIVTIIAVDITERKRAEEELAASQKLYKSLTDVLPLHLYRKDRHDRITFANPAYLNF
LGMTLEECLGKTTPDIVPHDLVPHCLAADAQVLRTGEPVSRVEMSEATGDRQYFQSMKSP
VLDADGQLVEIQGLCWEITDRIKTEKSLELHSLIVQNMAEGVCLVRASDGIIVYANPKFE
AMFGYESGGLNGKHASAVNYEDDTLDAQEVHRNITYHLDTYGEYTYTICNRKKDGTPFWC
RATTVRFDHPDYGMVYVAVHEDITERRQAELALQEMSAAMSNAIEGIARLDPQGQYLSVN
RAYARIMGYEPADMIGMNWRQTVHPEELETAIAGYESMLRHGKAELELRGLRKDGSIFYK
QAIMVAAYNPEGQFTGHHCFMRDISDRKQAEAALARELARSKALFEASVDGIVVMSKGRV
IEANPSFARMLGYSLEEVQSLTVADWEAQWTAEELVQIKAEFKDRSHRFETRHRRKDGSI
YEVEISANPVNWDGQTVQLCICRDVSDRKRTELELKQAKETAEAANSAKSTFLANMSHEL
RTPLNAILGFSQLLAYDPLLNDSQREQLEIINHSGEHLLSLINDILEVSKIEAGRIKLNT
SSFDLYQLLDGLMQLLRFKASEKSISLVLDRAPNLPQYVVTDEGKLRQILLNLLSNAIKF
TKAGSVTLRALVAEAPDHLPNDSSQPNTPQTQRLQFEVIDTGCGIAAEEIEDLFNAFVQA
KHSQQASEGTGLGLTISRHFVNLMGGDIRVQSALGQGSTFAFEIQVQVKDAAAVLLPVET
RRVLTLAQDQEPCRILIVEDQWQNRQFLVELLASIGFELKEATNGYEAIACWSTWQPDLI
LMDLRMPGMNGFDAVRQIRQDEQTLRSQIQTRSNTDYPPIKTAKIIALTADAFEETKVTA
LAAGCDDFIRKPVQESLLLNKIAEHLGVQYIYEMAETGQPEANESAENLDENLDNDLSFM
PVEWIAELHQAATEGFDDRVLQLVRQIPPDYSRLARALTHWATNFQFESITQLTQPLIEY
EADSAP
NT seq
6321 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgcatcttttcaaaaatcgcgcttcggatcagcaagcggaaacgcaggcttgc
tgtgagtcagtattccgcgaggtttttcaggcgaatccggcggcgagtctgctgctgtct
tttcccgaagggcggattctagaaatcaacgaggcgttttgtgagctggtgggatggagc
gccagcgagatggcggggcggccgattgctaagacgggcatctgggcagaggagggcagc
tacgcacggcttgttcagcagattcagacagaggggacggtgagcgcgatcgccgatgtt
ttttgcacccgcgctggcagtcgccggcccgtgctgctgtcggcccgtgctgtgtcgttt
ggcaacgaaccgagcctctggattacggcgatcgcccagcccactgaacctgtcgaatct
tctcagcccgcacctccgcaccttgccagccagattctcgatcaggcggcggcatcgatc
gggcagattcgcctgtatcccgatcgccgctggcagtatgactattgctccgcaggctgc
gagcgggtgtttggctttacgaatgcagaactaatggacggcgcatggctggagcgggtg
ctgccggaagatcgagaaacggtgctttcccaagaagtggaggcgattttggctgggcga
tcgcaccgcatggagtaccgttttttgcacaaagacggcactctgcgatggatggcaagc
cacctgtcgccccgctgggatgccgcagaaaactgctggcgggtgacgtttgtggataca
gacatcaccgagcaaaagcgcctagaagcggaactgcgaaacatcgcaacagccttgcgc
cagagtgaggaacggtttcaccaaattgccaacagcatcaagcagtttattctgatccgc
gatgctcagtcggggcggtgtttgtatgccagtccgggttatgaagcgatctggggccgc
agttgcgaaagcctgtatcaagaccgtgactcttggatagaggcggtgcatccagaggat
cgtctagatgtagaagaagtcgtacagcgccagtttcagggcgatcgcatccatcacgaa
taccgaatcttccgacccgatggcacgctccgctgggtgcaggcggaagtttttcccgtc
ctagacgaaacgggcgcatttactcgctgtgcgggcattatcgaagacattaccgagcgc
aaacagctagaagccgagcggcgggccgctgaggaatcgctgcgccagagcgaagagaga
ttccagcaaatcgccaaccatgtcaaccagctttttctggtgtgcgatgccaaaacgggt
gaatacctctacattagcccggcctacgagcgaatctggggccgcagttgcgaaagcttg
taccgcaatccccagtcttggctagaggcagtgcatccgggcgatcgccccacggttctt
gcgtctattgccagccaacgtcagggcgaaaccacgcatcgcgaatatcgcatcgttcgc
cccgatgggagcattcgctgggtgcgggcagatgtcttccctgttcgggatgaggcaggc
agcatcattcgcttcgtgggctttgcagaagatttcaccgagcgcaaacgggccgaactg
gcccgcgacctggctgaagccgccctgcgagactcagagaagcgatatgcatccttcttt
cgctgtagcccagcggcgatcgtcgtctcctgcctaccgacggggcaatatatcgaggtc
aatcccgccttcgagcaatacacaggctatacccgtgatgaagtcatcggacgcaccgcc
gtcgaacttgacctgtgggtcgatctgccccagcgagaacaactgctgcaacaggtgcaa
acccaaggcggcgcagcagaaattgagtttcaactgcgctgtaaagatggagaagttcgc
acggtcttgataacggcggagcgctacgaaatcgacggctacgagtatctgatgacggtt
ggtgtagacgtgaccgaccgcaagcgagtcgaagccgcgctgcaagccagcgaacaacac
cgacggcaggcgctagagctaagccagacgggcagttgggcgtttgacttaggcacaggc
gaggcgatctggagcgacagccacttccgcctgatggggctgcggccgggagagtatccc
agcaactactacacctggcgcgatcgtgtccatccagaagacctggagtgggtagagcag
gcactccagcaggcactcgaacagcacacgctgctagaagtcgagtatcgcgtggtgcat
cccgacggcaccgagcgctggatgctgaccaagggccaggggatttatgacgagagtgga
cagcccctccgcatgacgggcgtaatgatagacattagcgatcgcaaagcggcagaactt
gccctccagcagaaggtgcagcgggaacaggcacttaaccgagtgattcaggcgattcgc
cgatctttagacttggatgcgatctttagcactgcaacccaggaaattacacaactgctg
ggcgcagatcaggccaacgttatacagcttttctccgagcgcggccactggcagattgta
gcgagccaccgcgcccaccccgatttgccggatgtgaaggggttgcaaattccggatgcc
gacaatcccatcgcggcccggcttcggcacatggaaattgtcaaaattgatgatgctagc
ctgcttgaagatgatgtaaatcgccaacttgcagagctttttccaggctcttggctgatc
gccccaatggcaatagacggccgggtttggggctgcctcgccgtaaccaagaatccaaag
actgtttggactgaggagcaatgtagcttaattcaggcgctggtggatcaactggcgatc
gccattcagcaggccgccctctaccagcggctgcaagagtcagaggctagcctgaaggac
gtgctaaacaatgcgatcgccgctgtgtgcagcttccgcgtctttagcaatcacgactgg
gtgtatgactactattccacagggagccgagccgtctatggctatgctccagaagaactc
atggccgacaagcatctgtggatgtcgcgagtccacccggatgacctagaaaccgtcatc
ctgccgctctacgacgtgatttttcgggagggcacctgcacctacgaatatcggttttac
tgcaaagacggatcgctgcgctggcacctgtccacgctcacgtcccgccgagatgcgatc
gccgacagttggattgtgaccatcattgccgtcgatattaccgagcgcaagcgggctgaa
gaagaattggccgccagccagaagctatataaatctctgaccgatgtgctgccgctgcat
ctctatcgcaaggatcggcacgatcgcattacgttcgccaatcctgcctaccttaatttc
ttgggcatgaccctagaagagtgcttgggcaagaccactcccgacattgtgccgcatgat
ttggttccacattgccttgcggcagatgcacaagtcctgcgaaccggagaacctgtcagc
cgtgttgaaatgtcggaagccacgggcgatcgccaatacttccaaagcatgaaaagcccg
gtgttggacgctgacgggcaacttgtagaaattcaaggactctgctgggaaatcaccgac
cgcatcaaaactgagaaatctctggaactgcacagcctaattgtgcagaacatggccgaa
ggcgtgtgcctggtgcgggcgagcgacggcatcatcgtctacgccaaccccaagttcgag
gccatgtttggctacgaaagcggcggactcaacggcaaacacgcctccgccgtgaactac
gaagacgacacgctggatgcccaggaagtccatcgcaacatcacctatcacctcgatacc
tacggcgaatatacctacaccatctgcaaccgcaaaaaagacggcacgcccttttggtgc
cgagctaccaccgttcggttcgaccatcccgactatggcatggtctatgtcgccgtccac
gaagacatcaccgagcggcggcaggcagaattagcacttcaggaaatgagtgccgccatg
agcaacgccatcgagggcattgcacggctcgacccacagggacaatatctgtctgtcaac
cgagcctacgctcggatcatgggctatgagccagcagacatgatcgggatgaactggcgg
caaaccgttcaccccgaagaactggagacggcgatcgcaggctatgagtctatgctgcga
cacggcaaggccgagctagaactgcggggtctccgcaaggatggctctatcttctataag
caggccattatggtggcggcctacaacccggaagggcagttcaccggccatcactgtttt
atgagagatatcagcgatcgcaagcaggcagaagccgccctcgccagagaattagcccgc
agcaaagccctgtttgaggcatccgtagacggcattgtggtgatgtccaaggggcgagtg
atagaagccaatcccagctttgcccggatgctgggctattcgctagaggaagtccaatcc
ctgacagttgccgattgggaagcgcagtggaccgcagaggaactggtgcaaatcaaggcc
gagtttaaagaccggagccatcggtttgaaacgcgccatcgccgcaaagatggctcgatc
tacgaggttgaaattagcgctaatccggtcaactgggatgggcaaacggtgcagctttgt
atttgtcgggatgtgagcgatcgcaagcgcaccgagctagagctaaagcaagccaaagaa
accgctgaggccgccaattctgccaagagtacattcctggccaacatgagccacgaactc
cgaaccccgctcaacgccatccttggatttagccagcttctagcctacgatcccctgctc
aacgacagccagcgagagcaattagaaatcattaaccacagcggcgaacatttgctgagt
ttgatcaacgacattttagaagtctcgaagatcgaagccggtcgaattaagctcaacacc
agtagctttgacttgtatcaactgctggatggactgatgcaactgttgcgcttcaaggca
tccgagaaaagtatttcactggtgctagatcgcgccccaaacctgccgcagtatgtcgtg
acggatgaaggcaagctgcgacaaatcttactcaacttactcagcaatgccatcaagttc
actaaggcgggtagcgtgactttgcgggctttggttgccgaagcacctgaccacttgccc
aatgactcttcgcagccgaacaccccccaaacccagcgactccagtttgaagtcatcgac
acgggctgtggcattgcggcggaggaaattgaagacttgtttaatgcctttgtccaggcg
aagcatagtcaacaagccagtgagggcacagggttggggctgacgattagccgtcacttt
gtaaacttgatgggtggcgacatccgcgttcaaagcgccttggggcagggcagcactttc
gcctttgagattcaggtgcaggtgaaagacgctgcggctgtgttgctgcctgtcgaaact
cgccgcgtgctgaccctggcgcaagatcaggaaccctgccggattctgattgtcgaagac
caatggcagaatcggcagttcttggtggagttgcttgcgtccattgggtttgagctaaag
gaagcaacgaatggttatgaggcgatcgcctgctggtctacctggcaacccgatctaatc
ctgatggatttgcgaatgccgggaatgaatgggttcgacgcagttcgacaaatccgccag
gatgaacagacactcaggtctcaaattcaaacgcgaagcaacacagattatcccccaatt
aagaccgctaaaattattgcgctgacggcggatgcgtttgaagaaaccaaagtcacagcg
ctggcggccggttgcgacgactttattcgcaagcccgtacaagagagcctgctgctgaac
aagattgctgaacatttgggcgttcaatatatctatgaaatggctgaaacggggcaaccg
gaagcgaatgaatctgcggaaaatttagacgaaaatttagacaacgatctatcgttcatg
cctgttgaatggatcgccgaactgcatcaggcagcaacagaaggatttgacgatcgcgtt
ttgcaactggtgcggcaaattccgccagattattcccgcttggctagagctttaacccac
tgggcaacaaacttccagttcgagtctattactcaactgacgcagccgctcatcgaatac
gaggcagactcagcaccctag
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