Thermoleptolyngbya oregonensis: HNI00_21450
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Entry
HNI00_21450 CDS
T09452
Name
(GenBank) GAF domain-containing protein
KO
K11525
methyl-accepting chemotaxis protein PixJ
Organism
tog
Thermoleptolyngbya oregonensis
Pathway
tog02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HNI00_21450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tog02035
]
HNI00_21450
Bacterial motility proteins [BR:
tog02035
]
Pilus system
Positive phototactic motility proteins
HNI00_21450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
MCPsignal
GAF_2
HAMP
GAF_3
Enterochelin_N
Motif
Other DBs
NCBI-ProteinID:
WOB45408
UniProt:
A0AA96YBL9
LinkDB
All DBs
Position
complement(5146584..5149745)
Genome browser
AA seq
1053 aa
AA seq
DB search
MRNQAKSELSVIAIAYDIKVNQMGFGFQVQADNRAIVSAAATHAAGGRLSPELEAEVRAI
LQNEVKTYGIEYATLVGKDLRIIASANAKRTGQRFDPNGLVGTVLQNPRQVKATAIVSWN
ELKNEAPPLPEGLGGQDALIRYTVTPVFAPDTKEVIGVLVSGDIVNGKLRIVEKPLSAFG
NGYGAVYQVQPDGSLALTTALAAGDNPDISQAIPDVALEDPQLLRDAIAARGQVVTRRGP
VGSMTHTLAAKAIPNFNGEPTAVLVRGSSETPLNRLIIESLGLQFLVSLVAIAVNLLLAR
LLGLSILRPVRQLQSTAQRFIQGDRQARAEIYGTDELGEVAQVFNKLADSVVQTEAVLRM
QSEREKQSTERAMTLAEVTSRIRQSLDERTILTTSVEGVREVLKVDRVLIYRFAPDLKSG
EITAEAVGRGWKRAMGQIIEDPLSPEAIERYYTGRVSFMTNRETAELTHCHCEILKRLEV
QANMAAPILAGDELVGLLCAHQCSSPRQWEVAEVELLQQISVQIGYALSQARLLQKQQAA
AEKERQLAEVVARMRESFEEPRILRVAVTEARRSLNCQRVAVYAFDENWQGTFIAESVES
GYPAALSNKIYDPCFAEKYVEQYRQGRVQAVADITQAGLTECHLEQLKPYQVRANLVAPI
LIGEDLMGLLIAHQCDAPRVWNQLEINFFRQVATQLGYAIEQARLFNQANMLSEERRRQQ
ETLQRQLMSLLDDVEGAASGDLTVRADVTAGEIGTVADFFNSIIESLRQIVTQVKRSANR
VNESLGQNESAIAALANAALKQAEETTRIMDSVEVMTHSVQQVSQQAQQAATVAHTASAT
AEVSGSAMDLTVQNILNLREIIGETSKKVKRLGESSQQISKAVSLINQIAMQTNLLAINA
GIEAARAGEEGQGFAVVAEEVGELAARSADATKEIERIVENIQQETVEVVEAMEQSTSKV
VEGTHYVEDAKRNLMQILDLSRQIDELVQSISQATVSQVETSAAVSMLMQEVAQVSELTS
DSSRKISGALAETVEVARELQASVGAFKTGEQV
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaaaccaagcaaaatctgagctgtcggtgatcgcaattgcctacgatatcaaagtc
aaccaaatgggctttgggtttcaagtgcaggctgataacagagcgattgtttccgcggca
gctacccacgccgcaggcggccgcctttcgcctgaactcgaagcagaagttagggctatt
ttgcaaaatgaggtaaaaacctacgggattgaatacgccacgctcgtgggtaaggatttg
cggattatcgccagcgctaatgcaaaacgcactggacagcgatttgatcccaatggactc
gtgggtacggtgctgcaaaatccaaggcaggttaaagcgacagcaattgtctcgtggaac
gagctaaaaaacgaagcgccgcctctgccggagggcttgggggggcaggatgcgctaatt
cgctacacagtgaccccagtttttgcacctgatacgaaagaggtgattggggtgctagtg
tcgggggatatcgttaatggcaagctaaggattgtagaaaaaccgctctctgcatttgga
aatgggtatggtgcagtttatcaagtgcagcccgatggtagcttggcgctgacaaccgcg
ctagcagcaggagacaaccccgatattagtcaagcaatcccagatgtcgccctagaagat
ccgcaactgctgcgcgatgcgatcgccgcacgcggtcaggtggtaacccggcgtgggcca
gttggctcaatgacccatacgctggctgccaaggcaattcccaactttaacggtgagcca
acggccgtgttggtgcgggggagttctgaaactccgttgaatcggctgatcatcgaaagt
ctagggttgcagtttttggtttcgctggttgcgattgcggtgaacctgttgctggcaagg
ctgctgggtctgtctatcctgcgtccagtgcggcaactgcaatccaccgcccagcgcttt
attcagggcgatcgccaggctcgcgccgagatctacggcactgacgaactcggagaagtg
gctcaagtctttaacaaactggcagacagcgtcgtgcaaaccgaagcagtcttgcggatg
caaagtgagcgcgaaaagcagtctaccgaacgcgccatgacgctagcagaagtcaccagc
cgaattcgccaatctcttgacgaaaggacaatcctgacaacctccgtagagggcgtgcgg
gaagtgctgaaggtcgatcgggtgctgatctatcgctttgctcccgacctaaaaagtggc
gaaatcactgctgaggccgtcgggcgtggatggaagcgagccatggggcaaatcattgag
gaccccctcagccccgaagccattgagcgctactacacgggtcgagtcagctttatgacc
aatcgcgaaaccgccgaattgacccactgccactgcgaaattctgaaacgcctagaggtg
caggccaacatggcggcccccattttggcgggtgatgagttggtgggactgctatgtgcc
catcaatgctctagcccacggcagtgggaagtggccgaagttgagctgctgcaacaaatt
tccgtgcagattggttatgccctgagtcaggcaaggctcttgcaaaaacagcaagcagcc
gccgagaaggaacgccagctcgccgaggttgtggcacggatgcgggaaagctttgaggag
ccgcggattctgcgagtggcggtgactgaggcccggcgatcgctcaactgccagcgggtt
gcggtctatgccttcgacgaaaactggcagggcaccttcattgccgaatcggtcgaatcg
ggctatccggccgccctgtctaacaagatttacgacccctgctttgccgagaaatatgta
gagcaatatcgccaggggcgtgtgcaagcggtcgccgacattacccaagccggactcacc
gaatgccatctcgaacagctcaaaccctaccaggttcgggccaacctcgttgcgcctatc
ctgattggcgaagatctgatgggcttgctgattgcccaccagtgtgatgcgccccgcgtc
tggaatcagcttgaaatcaacttcttccgccaagtcgcaacccagcttggctatgcgatc
gagcaagctcgcctgtttaaccaagccaacatgctctctgaagaacgccgtcggcagcaa
gaaacgctccaacgtcagctgatgtctttgctcgacgatgtggaaggggcagcttcgggc
gacctcacggttcgagcggacgtgacggctggggaaattggcacggttgccgactttttc
aactctattattgagagcttgcgccagattgtgacccaggtgaagcgttccgctaaccgc
gtgaatgagtctctcggacaaaacgagagtgccatcgccgcgctagcaaatgcagccctc
aagcaggctgaggaaaccacgcgcattatggactcggtggaagttatgacgcactccgtt
cagcaagtctcgcaacaggcgcagcaggcggctacggtggcccatacagcctccgccacc
gccgaggtcagcggcagtgcgatggacttgacggtgcaaaacattctcaatctgcgggaa
atcatcggagaaacgtccaagaaagtgaagcgtttgggtgaatcatcgcagcaaatttcc
aaggccgtgtcgctgattaaccaaattgccatgcaaacgaacttgctggcgattaacgct
gggattgaggcggctcgcgcgggcgaagaaggccaggggtttgcagtggtggcagaagag
gtgggagaactggcggctcggtctgcggatgcgacaaaggaaattgagcgcattgtagaa
aacatccagcaggaaacggtcgaggtggtcgaagcgatggagcaaagcaccagcaaggtg
gtcgagggcacccactatgtggaagatgcgaagcgaaacttgatgcaaattctggatctg
tcgcgtcaaattgacgaactggtgcagtcgatttcgcaggcaaccgtgtctcaggtggaa
acgtctgcggctgtgtcgatgctgatgcaggaagtggctcaggtgtcggagttgacctct
gattcgtcgcgcaagatctctggggcgctggcagaaacggtcgaagttgcccgcgaactg
caagcctcggtcggtgcctttaagacaggagaacaggtttag
DBGET
integrated database retrieval system