Thermoleptolyngbya oregonensis: HNI00_21590
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Entry
HNI00_21590 CDS
T09452
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tog
Thermoleptolyngbya oregonensis
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tog03032
]
HNI00_21590 (gyrB)
03400 DNA repair and recombination proteins [BR:
tog03400
]
HNI00_21590 (gyrB)
Enzymes [BR:
tog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HNI00_21590 (gyrB)
DNA replication proteins [BR:
tog03032
]
Prokaryotic type
DNA Topoisomerases
HNI00_21590 (gyrB)
DNA repair and recombination proteins [BR:
tog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HNI00_21590 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WOB45434
UniProt:
A0AA96Y809
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Position
complement(5187359..5189296)
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AA seq
645 aa
AA seq
DB search
MTTNYDAEQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCKHIQV
TLNADGSVTVTDDGRGIPTGIHPRTGKSALETVLTILHAGGKFGQGGYKVSGGLHGVGIS
VVNALSEWVEVTVWRDKKVHKMRFERGLTKGEMDIQPYKENRTGTSVTFMPDIAIFTTGI
EFDYNTLAGRLRELAYLNAGVEITFTDNRLELLKSDEPRVETYHYAGGIREYVEYMNHEK
QPLHEEIIYVQGERNNVEVEVALQWCVDAYSDNLLGFANNIRTVDGGTHLEGLKAVLTRT
MNAIARKRNKLKESDSNLAGENVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDTL
VGEALSEYLDFRPNVADAILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSS
RDPGESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALIT
ALGLGIKGEEFDASQLRYHRIIIMTDADVDGAHIRTLLLTFFYRYQRAMVDQGYVYIACP
PLYKIERGRNHYYCYSDRERDQLIASFPENAKVETQRFKGLGEMMPQQLWDTTMNPDSRT
LKRVEIEDAAEADRIFTVLMGDRVAPRREFIETYGPKLNLTDLDI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaactacgatgccgaacaaattcaagtcctagagggcttggaagccgttcgc
aagcgtccggggatgtatatcggcagcacggggccgcgggggctgcatcacttggtctac
gaggtggtggataactcggtagacgaagcgctagctggctattgcaaacatatccaggtc
accctcaacgcagatggatcagtcacggtaactgacgacggtcggggcattcctacaggc
attcacccgcgcacgggcaaatcggccctggagacggtgctgacgattctgcacgcaggc
ggcaagtttggccagggcggctataaagtgtcgggtggtctgcacggcgtgggcatttcg
gtggtgaatgcgctgtcggaatgggtagaggtcacggtctggcgcgacaagaaagtgcat
aagatgcgctttgagcggggtctcaccaaaggcgagatggacattcagccttacaaagag
aaccgcacaggcacgtctgtcacctttatgcccgatattgcaatctttaccacgggcatc
gagtttgactacaacacgctggcaggtcgtctgcgggagctggcgtatctgaatgcgggc
gtagaaattacctttaccgacaatcgcctggaactgctgaaaagcgacgagccgcgagtc
gaaacctaccactatgcgggcggcattcgggaatacgtggaatatatgaaccacgaaaag
cagccgctccacgaagagattatctacgtgcagggtgagcgcaacaacgtagaagtggag
gtggcgctgcaatggtgcgtggatgcgtattccgataacctgctaggctttgccaacaac
atccgcacggtagacggcgggacgcacctagaggggctaaaggcagtgctgacgcggacg
atgaatgcgatcgcccgcaaacgcaacaagctgaaagaatccgactctaatctggcgggt
gaaaatgtccgcgagggcttgacggccgtgatctccgtcaaagtgcctgaccctgagttt
gaaggacagacaaaaaccaagctgggcaatacggaagtgcgcggcattgtggatacgcta
gtgggcgaggccctgagcgagtacctcgactttcgccccaacgtagccgacgcgattctc
gaaaaagcaatccaggccttcaacgcggcagaggcagcgcggcgggcaagggaactggtg
cgccgcaagtcggtgctggaatcttccaccttgccgggtaagttagcagactgtagctct
cgcgatccgggcgagtcagaaattttcattgtggaaggcgactcggcgggcggctctgcc
aagcaagggcgcgatcgccgctttcaggccatcctgccgctgcggggtaagatcctcaat
attgaaaaaacagacgatgccaagatctacaaaaacacggagattcaggcgctgattacg
gcgctgggtctgggcatcaagggcgaagagtttgacgcatcgcaactgcgctatcaccgc
atcatcatcatgacggacgcagatgtggacggcgcacacatccgcaccctgctgctcacg
tttttctatcgctatcagcgagcaatggtggatcaaggctatgtctacatcgcctgcccg
ccgctctacaagatcgagcgcggccgcaaccactactactgctacagcgatcgcgaacgg
gatcagctcattgccagcttccccgaaaacgccaaagtggaaactcagcgcttcaaaggt
ctgggcgaaatgatgccgcagcagctttgggacaccaccatgaaccccgacagccggacg
ctcaagcgcgtagaaattgaagatgctgccgaagccgaccgcatctttaccgtgctaatg
ggcgatcgcgtggcccctcgccgcgagttcattgaaacctacggcccgaagctcaacctt
actgacctggatatttag
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