Tannerella serpentiformis: BCB71_01115
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Entry
BCB71_01115 CDS
T04474
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
toh
Tannerella serpentiformis
Pathway
toh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
toh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BCB71_01115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
toh03021
]
BCB71_01115
Transcription machinery [BR:
toh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BCB71_01115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
dCache_3
Motif
Other DBs
NCBI-ProteinID:
AOH39871
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All DBs
Position
complement(275109..275969)
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AA seq
286 aa
AA seq
DB search
MRQLKITKSITNRESASLDKYLQEIGREDLITVEEEVELAQAIKKGDRKALEKLTKANLR
FVVSVAKQYQNQGLSLPDLINEGNLGLIKAAEKFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNQVGSLNKIGKVLSRFEQENERRPSAEELAEELDIPVDKITDTLKVSGRHV
SVDAPFVEGEDNSLLDVLVNEDTPNTDGTLMYESLSREIDRALATLTERESDIIKMFFGI
GCQEVTLEEIGDKFGLTRERVRQIKEKAIRRLRQGTRSKLLKTYLG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattaaagattaccaagtcaatcaccaatcgtgagagtgcatcgttagacaaa
tacctccaagagatcggccgcgaagacctgatcaccgtcgaggaagaagtcgaacttgca
caagccatcaagaaaggcgaccgcaaagcgctggagaagctcaccaaagccaacctgcgc
ttcgtcgtttccgtggctaagcagtaccagaaccaaggcctgagcctgcccgacctcatc
aacgagggcaacctgggactgatcaaagccgccgagaaattcgacgagacacgcgggttc
aagttcatctcttacgccgtgtggtggatccgccaatccatcttgcaggccctggccgag
cagtcacgtatcgtgcgcttgccgctcaatcaggtcgggtcgctcaacaagatcggcaag
gtgctttcccgctttgagcaggagaatgagcgtcgcccgtcggccgaagagctggccgaa
gagttggacatccccgtggacaagatcacggacaccctcaaggtctccggccgacacgtc
tcggtggacgcccccttcgtcgaaggcgaggataacagcctgctcgatgtgcttgtcaac
gaggacacccccaacacggatgggacattgatgtacgaatcgctgtcgagggaaatcgac
agagcacttgctacactcaccgagcgcgaaagcgacatcattaagatgttcttcggcatc
ggctgccaagaagtcacactggaagagatcggcgataaattcgggctcactcgcgagcgc
gtccgccagatcaaggagaaagctatccgacgcttacggcagggtacacgcagcaagctg
ctgaaaacttatttgggttga
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