Tannerella serpentiformis: BCB71_04665
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Entry
BCB71_04665 CDS
T04474
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
toh
Tannerella serpentiformis
Pathway
toh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
toh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCB71_04665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
toh03019
]
BCB71_04665
Enzymes [BR:
toh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCB71_04665
Messenger RNA biogenesis [BR:
toh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCB71_04665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Utp25_C
Cas3-like_C_2
ERCC3_RAD25_C
SMC_N
AAA_22
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AOH40482
LinkDB
All DBs
Position
1126039..1127349
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AA seq
436 aa
AA seq
DB search
MRFDELDLDDAVLDGLEAMNFVETTPIQELAIPPILAGKDLIGCAQTGTGKTAAYVLPII
SQLSRGGYPQDAINAVIMAPTRELAQQIDQQIDGFTYFVSVSAVAVYGGTDGIAYARQER
GLQMGADIVIATPGRLISHLNMGSVDLSRTSFFVLDEADRMLDMGFHDDIMQIYKQLPET
CQVVMFSATMPPKIRTLAHNILKDPEEIKIAVSRPPESIMQTAYICYEAHKMPLLKQLFA
KKAPERVIIFSSSKMKVKELAATLKRMNFNVAAMHSDLEQSEREQVMKDFRNGHIGMLVA
TDVVARGIDINDISLVINYDIPNDPEDYVHRIGRTARGTEGSGLAITFVSQQEQARFKEI
ETFIEKDIYKIPIDPSIGESPTYEPEKYSRTRGKGGRGRQSGGGGGRAKAQSTSSKPRGG
GNRRRNKPSQNRPAHS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgatgaattagacctcgacgacgccgtgttggacggactcgaggccatgaat
ttcgtggagacgacacctatccaagaactggccatcccgcccatcctcgcgggcaaggac
ttgatcgggtgcgcacagacgggcaccggcaagacggccgcctacgtgctgcccatcatc
agccagctgagccgaggcggatatccacaggatgcgatcaatgcggtcattatggcaccg
acgcgcgaactggcgcagcagatcgatcagcagatcgacggctttacctacttcgtttcc
gtttcggcggtggctgtctacggtggtaccgacggcatcgcctacgcccggcaggagcgc
ggattgcagatgggtgccgacatcgttatcgccacgcctggccgcctgatcagccacttg
aacatgggcagtgtggacctctcgcgcacctccttcttcgtccttgacgaggccgatcgc
atgctcgatatgggtttccatgacgacattatgcagatctataagcagctcccggagacg
tgtcaagtagtcatgttctcggctaccatgccgcctaagatccggacgctggcgcacaac
atcctgaaggatccggaagagattaaaatcgctgtatcgcgtccgccggaatcgattatg
cagacggcctacatctgctatgaggcccataagatgccgctcttgaagcagcttttcgcc
aagaaagctcccgagcgcgtcatcatcttctcgtcctccaagatgaaggtgaaagagctt
gcggcgacgctcaagcggatgaatttcaacgtggccgccatgcactccgacttggagcag
agcgagcgtgagcaggtgatgaaggacttccgaaacggtcatattggcatgctcgtggcg
acggacgttgtggcgcgtggcattgatatcaacgacatttcgctcgtcatcaactatgac
attcccaacgatcccgaggactatgtgcaccgcatcgggcgtacggcgcgcggcacggag
ggcagtggactggccatcacgttcgtctcgcaacaggaacaggcgcggttcaaggagatc
gagacgtttatcgaaaaggatatctataagatccccatcgatccctccatcggcgagtca
ccgacctatgagccggagaaatacagtcgcacgcgcggcaagggcggacgtgggcgccaa
agtggtggcggcggtggacgtgccaaggcacaatcgacctcctcaaagcctcgtggaggc
ggcaacaggcggcgtaacaagccctctcaaaaccgtccagcgcactcctga
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