Tannerella serpentiformis: BCB71_06675
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Entry
BCB71_06675 CDS
T04474
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
toh
Tannerella serpentiformis
Brite
KEGG Orthology (KO) [BR:
toh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
toh03009
]
BCB71_06675
Enzymes [BR:
toh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BCB71_06675
Ribosome biogenesis [BR:
toh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BCB71_06675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
MTS
N6_N4_Mtase
PCMT
FtsJ
Methyltransf_11
UPF0020
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
AOH40837
LinkDB
All DBs
Position
1620461..1621888
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AA seq
475 aa
AA seq
DB search
MTRKKKPCPVVEGVKVTDVAAEGKAVARIDERVVFIPWAAPGDVVDVRLTRRKSHYAEGT
IVAFRERSPLRVDPFCEHFGVCGGCKWQHLPYEEQLRFKQQQVVDALTRIGHVTPREVQP
ILGSEQTTHYRNKLEFTFSNRRWLTAEEIDSERNDTDMNALGFHIPGMFDKVLDIRRCHL
QDDVSNRIRLAVKKYCLTHDGYPFFDLKNNAGFVRTLMIRTSSAGGVMVVMAFYYEDRAR
REALLDFIAAEVPEITSLMYVINEKCNDTLTDQDIRLYRGVDHLIERMENLQFKVGPKSF
YQTNSQQAYRLYSVVREFAELSGCETVYDLYTGTGTIANFVARRSRRVIGIEYVPEAIDD
ARVNAGLNGIENAVFYAGDMKDMLTESFIEAHGRPDVVITDPPRTGMHNDVTDTILRAAP
ERIVYVSCNPATQARDIARMADQYEIVRIQPVDMFPHTHHVENVALLRKKCAEKC
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
ttgacacgaaagaaaaaaccgtgccccgtcgttgagggcgtgaaggtgacggacgtggcg
gctgaaggaaaagctgtcgcaagaattgacgagagagtggtgtttatcccttgggcggcc
ccgggagacgttgttgatgtgcgacttacgcgtagaaaaagtcattacgcagagggtaca
attgtcgcgtttcgagaaaggagcccactacgcgtggatccgttttgcgagcatttcggt
gtgtgcggaggctgcaagtggcaacatttaccgtacgaagaacagctgcgttttaagcag
cagcaagttgtcgacgccctgactcgcatcgggcacgtgacgccgcgtgaggtgcagccc
attcttggctccgagcagacgacgcactatcggaataagctcgaatttacgttctctaat
cgccgctggctaaccgcagaagagattgattcagaaaggaatgacacggacatgaatgca
ctgggcttccacattccgggcatgtttgataaggtgctggacattcgccgctgccaccta
caggacgacgtgtcgaaccgcatccgactcgccgtcaaaaaatattgcctcacgcacgat
ggctacccattttttgacctaaaaaataacgccgggttcgttcgcacgctcatgattcgc
acctcatcagcgggcggggtgatggtcgtgatggctttttattatgaggatcgcgcgcgc
agggaagcgctgctcgattttatcgccgcggaggtgcccgagatcacttccctgatgtat
gtcatcaacgaaaaatgtaatgacacattgaccgaccaagatattcgcctctatcgcggg
gtggatcatttgatcgagcgaatggaaaacctgcaatttaaggtcgggccgaaatccttc
tatcaaactaacagtcagcaggcttacaggctctattccgtggttcgtgaatttgccgag
ctcagcggttgcgaaacggtttacgacctctacacgggcacgggcacaattgccaatttc
gtagctcgtcgctcgcggcgcgtcatcggtattgaatatgtgccggaggctatcgacgac
gcacgcgtgaatgccggacttaacggcatcgaaaatgccgtcttttacgcgggcgacatg
aaggacatgctcaccgaatcgttcattgaggcacacgggcgacccgacgtggtgatcact
gacccgccacggacgggcatgcataacgacgtgactgacaccatcctacgagcagcaccc
gagcgcatcgtctacgtcagttgtaatcctgcgacgcaggctcgcgacattgcacggatg
gcggaccaatacgaaatcgtgcgcatccaacccgttgacatgtttccccacacgcatcac
gtggaaaacgtggctctactgagaaaaaagtgcgcagaaaaatgttag
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