Tannerella serpentiformis: BCB71_08035
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Entry
BCB71_08035 CDS
T04474
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
toh
Tannerella serpentiformis
Pathway
toh00040
Pentose and glucuronate interconversions
toh01100
Metabolic pathways
toh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
toh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BCB71_08035
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BCB71_08035
Enzymes [BR:
toh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BCB71_08035
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GFIT
Motif
Pfam:
Pectate_lyase_4
DUF5980
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AOH41070
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Position
complement(1968409..1970043)
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AA seq
544 aa
AA seq
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MKIGLYDNILLFLFLWVNTLACVSADTSRTVESQPIENGLIITESKGWLETIYAKWKPVD
EADGYYVYVKGRQYADYSKVDSELIRVYNGYVRVDIPGLKAGTYSLKIVAKKGGKETQSS
EVTGLKVLNYVREGFAHKNYSGVGAYNDDGTLKSGAVVIYVNKDNAKTVSAHLGKTTFIG
LQAILNAYQKGNITTPLSVRILGLLRNGDTDTFGSSTEGIQIKGKQADSEMNITIEGIGE
DASIYGFGFLVRNAKSVEFRNLGIMRAMDDGVSLDTNNSNIWVHHMDLFYGKASGGDHIK
GDGSIDVKTDSKFVTIDNCHFWDTGKTSMCGMKKETGPNYITYHHNWFDHSDSRQARVRT
MSVHLWNNYYDGCAKYGIGATMGCSVFSENNYFRATKNPILISKQGSDAKGTGKFSDEPG
GMVKEYGSLFTEKGAESTYTPISYADNNSSFDFYHAISRNEKVPASVKTLNGGNIYNNFD
TDAALMYSYTPDATALVPSQVTGFYGAGRLNHGSLQFKFNNTVEDTNSTPIPALEALIDA
YSGK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaagattggattgtatgataatattttattattcttatttttatgggttaacacatta
gcttgcgtttctgctgatacatcaagaactgtggagagtcagccaatagaaaatggactg
ataattactgagtcaaaaggatggttagagacaatttacgctaaatggaagcctgtagat
gaagcagatggttattatgtttatgtgaaaggtaggcaatatgctgattatagcaaggtt
gattccgagttgatacgcgtatataatggctatgtacgagttgatattccaggattaaaa
gctggcacttattctctgaaaatcgtagctaagaagggtggaaaagaaacccaatcgagt
gaggtaacaggactgaaagtcttgaattatgtgcgagagggctttgctcataagaattat
tcgggtgtaggtgcctataatgatgacggtacgttgaagtctggtgctgttgttatttat
gtaaataaagacaatgctaaaacagtcagtgctcatttaggtaagactacgttcataggt
cttcaggctattctcaatgcttatcagaaaggcaatatcaccacaccattgtctgttaga
atcttaggtttgcttagaaatggtgatactgataccttcggaagcagtacagaaggtata
cagattaagggaaagcaagcagatagtgagatgaatattactatagaaggaattggtgag
gacgccagtatttatggctttggcttcttggtaaggaatgctaagagtgttgaattccgc
aatttaggtatcatgcgagctatggacgatggcgtgtcacttgacacaaataattctaac
atatgggttcatcacatggatttattctacggaaaggcgagtggtggtgatcatattaag
ggagatggttctattgatgtgaagactgattcaaagtttgtcacaatagataattgtcat
ttctgggacacaggaaagacgagtatgtgtggtatgaagaaagaaacaggtccaaattat
atcacttatcaccacaactggtttgatcatagtgactctcgtcaagcacgagttcgtaca
atgagcgttcatttatggaataactactatgatggatgtgcaaaatacggaattggtgca
acgatgggttgcagtgttttctctgaaaacaactattttcgtgctacaaagaatcctatc
ttgatatcaaagcagggaagtgatgcaaagggtactggcaaattctctgatgagcctgga
ggtatggtgaaagagtatggaagcttatttacagaaaagggagcggagagtacttatacc
ccaattagttatgcagataataacagtagctttgatttttatcatgctatttcacgtaac
gaaaaggtgccagcttctgttaaaacgcttaatggtggaaatatctataacaactttgat
acagatgctgcactaatgtattcctataccccagatgcaaccgctcttgttccttctcag
gtcacgggattctacggcgcaggacgtttgaatcatggttctttgcaatttaaatttaac
aataccgtcgaagatacgaattctactcctataccagcattggaagcacttatcgatgct
tattcaggtaagtaa
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