Tannerella serpentiformis: BCB71_08430
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Entry
BCB71_08430 CDS
T04474
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
toh
Tannerella serpentiformis
Pathway
toh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
toh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCB71_08430 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
toh03019
]
BCB71_08430 (rny)
Messenger RNA biogenesis [BR:
toh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BCB71_08430 (rny)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
LapA_dom
Fez1
Motif
Other DBs
NCBI-ProteinID:
AOH41141
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All DBs
Position
2057254..2058795
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AA seq
513 aa
AA seq
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MSWIWMIVAFVAGGVIAALVVAAMNKATQAKRREEMQREMERETDVMKKNKMLEVKEKFI
QLKAELEKQVAARNSKIQSVETKLKQHELSLSQRQEELQRKLTEADILKENLNNQAQLIE
KRKLDLEKMHQQEVVHLETISGLSAGEAKERLIESLKDEAKTDAASYINEIMEEAKMTAN
MEAKKVVIKTIQRVATETAIENSVTVFHIDSDEIKGRIIGREGRNIRALEAATGIEIIVD
DTPEAIVLSGFDPVRREVARLALHQLVLDGRIHPARIEEVVNKVRKQVEEEIIETGKRTT
IDLGIHGLHPELVRLIGKMKYRSSYGQNLLQHARETANLCAVMAAELGLNPKKARRAGLL
HDIGKVPDDEPELPHAILGMKICEKYKEKPDICNAIGAHHDEVEMQTLLAPIVQVCDAIS
GARPGARREVVEAYIKRLNDLEQLAMSYPGVVKTYAIQAGRELRVIVGADKIDDKDTENL
SNEIAKKIQDEMTYPGQVKITVIRETRAVSYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagttggatatggatgattgtagccttcgtggccggcggagtgatcgccgcgctggtg
gtggccgcaatgaacaaagccacccaagccaagcgcagggaggaaatgcaacgcgaaatg
gaacgcgaaacggacgtgatgaagaagaacaagatgctggaggtgaaggagaagttcatc
cagctcaaggccgaactggagaagcaggtggccgcacgaaactccaaaatccagtccgtc
gagaccaagctcaagcaacacgagctgagcctcagccaacgccaagaggagctgcaacgt
aagctcaccgaggccgacatcctgaaggagaacctgaacaatcaggctcagctgatcgag
aagcgtaagctggatctggaaaagatgcaccagcaagaggtcgtacacctggagaccatc
tccggactctccgctggcgaagccaaagagcgcctcatcgagtcgctcaaggacgaagcc
aaaaccgacgccgcatcgtacatcaacgagatcatggaggaggccaaaatgacggccaac
atggaggccaaaaaggtggtcatcaagaccatccagcgcgtggccaccgagaccgccatc
gagaactccgtcaccgtctttcacatcgattcggacgagatcaagggccgcatcatcggc
cgcgaagggcgcaacatccgtgcactggaggccgctacgggcatcgaaatcattgtcgac
gacacgcccgaggccatcgtcctttcgggcttcgaccccgtgcggcgtgaggtggcccgg
ttggcactccatcagctcgtcctcgacggacgcatccacccggcacgcatcgaagaggtg
gtcaacaaggtgcgcaaacaggtcgaggaggagatcatcgaaaccggcaaacgcaccacg
atcgacctcggtatccacggcctacatccggagctggtgcgactaatcgggaagatgaaa
taccgttcgtcgtacggccagaacctcctccagcatgcccgcgagacagccaacctctgc
gccgtcatggccgcagagctgggcctgaacccgaagaaggcacgccgagccggactgttg
cacgacatcggcaaggtgcccgacgacgagcccgaattgccgcacgccatcctcggaatg
aagatctgcgagaagtacaaagagaagcccgacatctgcaacgccatcggcgcgcaccac
gatgaggtcgaaatgcagaccctgctggcacccatcgtgcaagtgtgcgacgccatctcc
ggcgcccgccccggtgcccgccgcgaggtggtggaggcctacatcaagcgtctcaacgac
ctcgagcagctggccatgtcatatcccggtgttgtcaagacgtacgccatacaagccggc
cgtgagctgcgcgtcattgtcggcgccgacaagatcgacgacaaggacacggagaacctc
tctaacgaaatcgccaagaagattcaggacgagatgacctacccgggacaagtcaagatc
accgtcatccgcgaaacccgcgccgtgagctacgccaagtga
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