Tannerella serpentiformis: BCB71_08450
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Entry
BCB71_08450 CDS
T04474
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
toh
Tannerella serpentiformis
Pathway
toh03410
Base excision repair
toh03430
Mismatch repair
toh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
toh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCB71_08450 (recJ)
03430 Mismatch repair
BCB71_08450 (recJ)
03440 Homologous recombination
BCB71_08450 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toh03400
]
BCB71_08450 (recJ)
DNA repair and recombination proteins [BR:
toh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BCB71_08450 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BCB71_08450 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BCB71_08450 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Peptidase_M55
Motif
Other DBs
NCBI-ProteinID:
AOH41144
LinkDB
All DBs
Position
2060925..2062658
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AA seq
577 aa
AA seq
DB search
MTHRWNIRPQTKEEIHLRDALAATLGLNPIISLLLVQRGITTADQALHYFNPDLRDLHDP
FLMPDMLKAVKRLNKALGNKERIMIYGDYDVDGTTAVALVYKFLRAYSSSIEYYIPDRYD
EGYGISFKSIDYAVSRGITLVISLDCGIKAIDKVAYANERGVDFIICDHHMPDDELPEAV
AVLDAKRADSQYPYAHLSGCGVGFKFMQAFAQSNDIPFSTLEGLLELVAVSIASDIVPIT
GENRILAFHGLRQLNNNPSFGLKGIINVCGLSGKDILVSDIVFKIGPRINASGRMMNGKE
AVDLLLSRDMEAAEELSENIDRYNEDRRELDKKITDEANAIIEQIHDMEAQKGIVVYDPT
WHKGVIGIVASRLTEKYCRPTVVLTRSSELITGSARSIPGFDIYRAIESCRDILENFGGH
MYAAGLSLREENLQAFIDRFMEQAARDIGPEQMTPQIDIDTVISLRDINTKLMADLKRME
PLGPENERPVFATMHVRDHGTSRRVGRELEHLKLELTDRHGGGPVHGIAFGMSEHSYYVK
QQNAFDLCYTLEENTYNDNTTLQLMVKDIRPSSIAEG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgacacacagatggaacatccgaccccaaacgaaagaggagatacacctccgagacgca
ttggccgccacgctggggcttaacccaatcatcagcctgctgctcgtgcagcgaggtatc
accaccgctgaccaggccctccactacttcaaccccgacctccgcgacctgcacgacccc
ttcctgatgcccgacatgctcaaggccgtcaagcgcctcaacaaggctttgggtaacaag
gagcggatcatgatttatggcgattacgacgtggatggcacaacggccgtggcgctggtc
tacaaattcctccgcgcctactcctcgtcgatcgaatactacatccccgaccgctacgat
gagggctacggcatctcgttcaagagcatcgactacgccgtcagccgtggcatcacactc
gtcatctcgctcgactgcggcatcaaagccatcgacaaggtggcctacgccaatgagcgc
ggcgtggacttcatcatctgcgaccaccacatgcccgacgacgagctgccggaggccgtg
gccgtgctcgatgccaaacgcgccgactcccagtatccctacgcccatctcagcggctgc
ggcgtgggcttcaagttcatgcaagcctttgcgcagagcaacgacatccccttcagtaca
ctcgaggggctgctcgagctcgtggccgtcagcatcgcctcggacatcgtccccatcacg
ggcgagaaccgcatcctggccttccacggcttacgccagctgaacaacaaccccagcttc
ggcctcaagggcatcatcaacgtctgcggactctccggcaaggacatcctcgtcagcgac
atcgtcttcaagatcggcccgcgcatcaacgcctccggacgcatgatgaacggcaaggaa
gccgtcgacctgctcctctcgcgcgacatggaggcagccgaggagctcagcgaaaacatc
gaccgctacaacgaggatcggcgcgagctggacaagaagatcaccgacgaggcgaacgcc
atcatcgagcagattcacgacatggaggcgcagaagggcatcgtcgtctacgaccccacg
tggcataagggcgtgatcggcatcgtggcctcacggctgacagagaaatactgtcggccg
acggtcgtcctcacccgctcatccgagctcatcaccggatcggcgcgctccatccctggc
ttcgacatctaccgcgccatcgagtcctgccgtgacatcctcgaaaacttcggtggacac
atgtacgctgctggtctctccctgcgtgaggagaacctccaagccttcatcgaccgcttc
atggagcaagccgcacgcgacatcggcccggagcagatgacgccacagatagacatcgac
accgtcatctccctccgcgacatcaacaccaagctcatggccgacctcaagcgcatggag
ccactcggcccagagaacgagcggcccgtcttcgccaccatgcatgtgcgtgaccacggc
accagtcggcgtgtcggtcgtgagctggagcacctcaagctcgagcttaccgaccgtcac
ggtggcggccccgtgcacggcattgccttcggcatgagcgagcacagctactacgtcaag
cagcaaaacgccttcgacctctgctacaccctcgaagagaacacctacaacgataacacc
acgctgcaactcatggtcaaggacatccgtccctcatcgatcgctgaggggtaa
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