Tannerella serpentiformis: BCB71_08455
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Entry
BCB71_08455 CDS
T04474
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
toh
Tannerella serpentiformis
Pathway
toh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
toh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCB71_08455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
toh03019
]
BCB71_08455
03400 DNA repair and recombination proteins [BR:
toh03400
]
BCB71_08455
Enzymes [BR:
toh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCB71_08455
Messenger RNA biogenesis [BR:
toh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCB71_08455
DNA repair and recombination proteins [BR:
toh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BCB71_08455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AOH41145
LinkDB
All DBs
Position
2062736..2064652
Genome browser
AA seq
638 aa
AA seq
DB search
MDRYHEILKKYWGYDAFRPLQEDIIRSVGAGRDTLALMPTGGGKSLTFQVPTLAMDGLCL
VVTPLIALMKDQVDNLRRRGIKATTVYMGMTTTEIDTQLDNCIFGDYKFLYLSPERLTTE
RFLTKLRAMRVCLLAVDECHCISQWGYDFRPSYLRIADIREALPTDVPVLALTATATPRT
VDDIQEKLHFRAPNVLRKSFARPNLTYLVRRCDDKLSQLIRILQRTQGSAVVYVRSRKRT
AEIASALHAEGITATFFHAGLSRDKKFERQRAWMDDQLRVMVATNAFGMGIDKPDVRLVV
HIDIPSSLEEYFQEAGRAGRDGEPAYAIALCDPRDTQRLRRRISNEYPDRDLILRVYDAL
GSHLGIASGYGLFTRHSFSLEAFCTIYRFSFIHAYYALKILELSGYLLYEEEPENASRVR
ILVTREDLYDLAHNTPHTDIVLRELLRSYSGLFADYVFIDEELLATRGQLTRAEVCEALI
QLSRAHIISYIPRRDTPRITFTRSREEPRHVRIPRSAYEERLERSQDRIKHVIEYITDDR
HCRSRLLLRYFGELHTADCRRCDVCNHHTRSGLVQWELNAVRDTLATLLRDRAPQSIHAI
VSRLPLSSEKNHHALRYLFDNDARFHLTDGLVSFHEEG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
gtggatcgctatcacgaaatcctcaagaagtactggggctacgatgccttccgaccgttg
caagaagacatcatccgctccgtcggggccggacgtgacacgctcgcgctcatgcctacc
ggaggcggcaagtcgctcactttccaagtccctacgctggctatggacgggctctgcctc
gtcgtcacaccgctcatcgccctgatgaaagaccaggtggacaacctgcgccgacgtggc
atcaaggccacgaccgtctacatgggcatgaccacgaccgagatcgacacgcagctcgac
aactgcatcttcggcgactacaagttcctctacctctctcccgaacgcctcaccacggag
cgcttcctgacgaagctccgcgccatgcgcgtctgcctgctggccgtcgacgagtgtcac
tgcatctcgcagtggggttacgatttccgaccctcctacctccgcattgccgacatccgc
gaggcgctcccgaccgacgttcccgtgctggccctcaccgccacggccacccctcgcacc
gtcgacgacattcaggagaagctccatttccgcgcccccaacgtcctccgcaagagcttc
gcccgacccaacctcacctacctcgtccgccgttgcgacgacaagctgagccagctcatt
cgcatcctccagcgcacccaaggatcagccgtcgtctacgtccgcagccgcaaacgcacc
gccgagatcgcctctgcgctgcatgctgaaggcatcacggccaccttctttcacgccgga
ctcagtcgcgacaaaaagttcgaacggcaacgcgcttggatggacgaccaactgcgcgtc
atggtggccacgaacgcctttggcatgggcatcgataagcccgacgtgcggctggtggtg
cacatcgacatccccagctcgctcgaggaatacttccaagaggccggacgtgccggacgc
gacggggagccggcctacgccatcgccctctgcgacccacgcgatacccagcgtctgcgc
cgacgaatcagcaacgaatatcccgaccgcgacctcatcctccgcgtttacgacgccctc
ggcagccacctcggcatcgcctccggctacggcctcttcacccgccacagcttctcgctc
gaggccttctgcaccatctatcgcttctccttcattcacgcctactacgccctcaaaatc
ctcgagctatcgggctacctgctctacgaggaggagcccgaaaacgcctcccgcgtgcgc
atcctcgtcacccgcgaggacctctacgacttggctcacaacacgccccacacggacatc
gtcctgcgggagctgctccgctcctacagcggactctttgccgattacgttttcatcgac
gaggagctactggccacccgcggccagctcacgcgcgctgaggtctgcgaggcgctcatc
cagctctcccgcgcgcacatcatcagctacatcccccgccgcgacacgcctcgcatcacc
ttcacccgctcccgtgaagagccgcgacacgtgcgcatcccacgctcggcctacgaggag
cgtctcgaacgcagccaagaccgcatcaaacatgtcatcgagtacatcaccgacgatcga
cactgccgatcgcgcctcctgctgcgttacttcggcgagctccacaccgccgactgtcgc
cgctgcgacgtctgcaaccatcatacccgctcaggcctcgtgcaatgggaactgaatgcc
gtccgcgacacactcgccacactgctccgcgaccgcgccccgcaatccatccacgccatc
gtcagccgcctccccctcagctccgaaaagaaccaccacgccctgcgctatctcttcgac
aacgacgcccgcttccacctcaccgacggcctcgtcagcttccatgaggagggctga
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