Tannerella serpentiformis: BCB71_10680
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Entry
BCB71_10680 CDS
T04474
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
toh
Tannerella serpentiformis
Pathway
toh03030
DNA replication
toh03410
Base excision repair
toh03420
Nucleotide excision repair
toh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
toh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCB71_10680
03410 Base excision repair
BCB71_10680
03420 Nucleotide excision repair
BCB71_10680
03440 Homologous recombination
BCB71_10680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
toh03032
]
BCB71_10680
03400 DNA repair and recombination proteins [BR:
toh03400
]
BCB71_10680
Enzymes [BR:
toh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BCB71_10680
DNA replication proteins [BR:
toh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BCB71_10680
DNA repair and recombination proteins [BR:
toh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BCB71_10680
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCB71_10680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
HHH
DUF6522
FAM186A-B_N
Motif
Other DBs
NCBI-ProteinID:
AOH41540
LinkDB
All DBs
Position
2637144..2639906
Genome browser
AA seq
920 aa
AA seq
DB search
MKLLLIDAYALIYRSYYAFIRNPRVNSKGMNTSAIFGFINSLDDALRRLTPTHAAIAFDP
AGPTFRHEAFPEYKAQREKTPEDIHASEPYIRRFIAARHIPLLEVARYEADDVIGTIATQ
AAQEQFDVYMMTPDKDYGQLVTDRIFQFRPRHGGDYETMGTAEVLAKYGLTSVSQVIDLL
GLMGDASDNIPGCPGVGEKTAQKLLTEFGSIERLLESTDQLKGALRTKIETHAEQIRFSK
FLATIVTDAPIRFDAAACAISEPDRDALRELYTELEFRSFLTKLDAEPTDTPAPGQQLSL
FANEPTAPPPSPDDADTTDATTTPHTYHLVDTDEERCALAERLNHAEAFAFDTETEGVDA
LHTRLVGMSFAVRAHEAWYVPVPADEEEARTTVAPFAVPLQNAAIRKVGQNIKFDLMVLI
KYGIRVDGPLFDTMIAHYLLHPELRHNMDYLSETYLRYRPIAIESLIGPRGKGQRSMREV
PVKDVCEYAAEDADVTWQLMEHFRPLLAEHGVEQLFHDIEMPLVPVLAEMEEAGVTLDTE
ALRQSSDELNTTLRNLEDEIHTLAGMEFNINSSRQVGTVLFEHLRLEEKVKKTKTGLYST
GEEVLEKLRSKHPIVDKLLDYRRVKKLLSTYIDALPERVDPATGKIHTSFNQTVTSTGRL
SSSNPNLQNIPVREELGREIRKAFTADDAESVFFSADYSQIELRIMAHFSGDEHMTDAFR
HGTDIHAATAAKIFGVAPEEVTSDMRRRAKTANFGIIYGISAFGLAERLAIPRAEARELI
DGYFASYPRIKAYMDASIQTATEQGYVETLFGRRMFLPDIRSRNAVVRGYAERGAINAPI
QGTAADIIKIAMIGIRHRFRQEHLRSRMILQVHDELNFNVRKEELDVVRQIVREEMEGAA
KLSVPLTVDCGTGRNWLEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctcctcatcgatgcttacgcactgatctaccgttcctactacgccttcata
cgcaatcctcgcgtcaactcgaagggcatgaacacctcggccatcttcggcttcatcaac
tcgcttgacgatgccctccgacgactcacgcccacccacgccgccatcgctttcgacccc
gccgggcccaccttccgccacgaggcctttcctgaatacaaggcgcaacgcgagaagacg
cctgaggacatccacgcatccgaaccctacatccgccgattcatcgcggccaggcacatc
cccctactcgaggtcgcgcgctacgaggccgacgacgtgatcggcaccattgccacgcag
gctgcgcaagagcagttcgatgtctatatgatgacgcccgacaaggattacgggcaactc
gtcaccgaccgcatcttccagtttcgaccgcgacacggcggcgattacgagacgatgggg
acggccgaggtgttggctaagtatggcctaacatccgtcagccaggtgatcgacctgctc
gggctgatgggcgacgcgtcggacaatatccccggctgcccaggtgtcggcgagaagacg
gcgcagaaactgctcaccgagtttggcagcatcgaacggctgctcgagtctaccgaccaa
ctcaagggcgcactccgcacgaagatcgagacgcacgccgagcagatccgcttctctaag
ttcctcgctacgatcgtcactgacgcacctattcggttcgacgccgccgcgtgtgccatc
agcgaacccgaccgcgacgcccttcgtgagctctacacagaactcgagttccgcagcttc
ctcacgaagctcgacgcggagccgaccgatactcccgcaccgggtcaacagctttcgctc
ttcgccaacgaaccgacggccccaccgccatcgcccgacgatgccgatacgaccgacgcc
accacgacgccgcacacgtatcatctggtcgataccgacgaagagcgttgcgccctcgcc
gaacggttgaaccacgctgaagccttcgccttcgacacggaaacggagggcgtcgacgca
ctccacacgcggttagtcggcatgtcgtttgctgtccgtgcccacgaagcgtggtatgtg
cccgtgccagccgacgaggaggaggcgcgcaccacggtcgctcccttcgccgtgccactt
cagaacgccgcgatccggaaggtggggcagaacatcaagttcgacctcatggtgctgatc
aaatacggcatccgagtcgacggcccactcttcgacacgatgatcgcccactacctgctc
caccccgaactgcgtcacaacatggattacctctccgagacttacctccgctatcgcccc
atcgccatcgagtcgctcatcgggccgcgtggcaaggggcaacgctcgatgcgcgaggtg
cccgtcaaggatgtctgcgaatacgccgcggaggacgccgacgtgacgtggcaattgatg
gagcatttccgcccactgctcgcggaacacggcgtggagcaactctttcacgacattgag
atgcccctcgtgcccgtccttgcagagatggaagaggccggcgtcacgcttgacacggag
gcgctccggcagtcgtccgacgagctaaacacgaccctccgcaacttggaggacgagatc
cacacgttggccggcatggagttcaacatcaactcgtcgcggcaggtcggcacggtgctc
tttgagcatttacggctggaggagaaggtgaaaaagacaaagacaggcctctacagcacg
ggcgaagaggtgctcgagaagttgcgcagcaaacacccaatcgtggacaagttgctcgac
taccggcgggtgaagaagctgctcagcacctacatcgacgccctgcccgagcgcgtagac
ccggcaacgggtaagatccacacctcgttcaaccagacggtgacctcgaccggccgattg
agctcgtcaaaccctaacctgcaaaacatccccgtgcgcgaggaactgggccgcgagatc
cgcaaagccttcaccgccgacgacgccgaatccgtcttcttttcggccgactattcgcag
atcgagctgcgcatcatggcccacttcagcggcgacgaacacatgaccgacgccttccgc
cacggcaccgacatccacgccgccacggccgccaagatcttcggcgtcgcccccgaggag
gtcacctccgacatgcgccgccgcgccaagacggccaactttggcatcatctacggcatc
tccgcctttggcctggccgagcgcctcgccatcccccgcgccgaagcccgcgagctgatc
gacggctacttcgcctcctacccccgcatcaaagcctacatggacgcatcgatccaaacg
gccacggagcaaggttacgtggagacgctcttcggccgccggatgttcctgcccgacatc
cggtcacgcaacgccgtcgtccgcggttacgccgagcggggcgccatcaatgccccgata
cagggcacagccgcagacatcattaagatcgccatgatcggcatccggcaccgtttccgc
caagagcacctccgcagccgcatgatcctacaagtgcacgacgaactcaacttcaacgtc
cggaaggaggagctggatgttgtccgtcagattgtccgcgaagagatggaaggcgccgcc
aagctcagtgtcccactgaccgtcgactgtggcacgggccgcaactggctcgaggcgcat
tga
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