Tannerella serpentiformis: BCB71_10955
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Entry
BCB71_10955 CDS
T04474
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
toh
Tannerella serpentiformis
Pathway
toh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
toh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCB71_10955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toh03400
]
BCB71_10955
DNA repair and recombination proteins [BR:
toh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCB71_10955
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BCB71_10955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
DnaJ_CXXCXGXG
nSTAND1
AAA_29
AAA_16
ATPase
AAA_15
Anti-TRAP
AAA_23
AAA_25
Viral_helicase1
DUF4350
DUF1451
AAA_22
cobW
RecA
DUF463
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
AOH41588
LinkDB
All DBs
Position
complement(2699616..2702105)
Genome browser
AA seq
829 aa
AA seq
DB search
MNKHRTSPQQIEIRGAHAHNLKHIDVDIPLNKIVGIAGVSGSGKSSLALGVLYAEGSRRY
LESLSTYTRRRMTQAARAQVDDVRYVPAALALHQRPAVPGIRSTFGTSTELLNSLRLMYS
RLSSHRCPNGHYLPPSINVAAERELICPECGAHFYAPGAEELAFNSQGACPTCDGTGLVS
HVDESTLVPDESLTIDEGAVAPWQTLMFSLMTDVCRAMGVRTDVPFKELTDKEREIVYHG
PAVKKHILYKSKTSNVAGEMDFTYYNAVYTVENALAKVTDEKGMKRVEKFLRQDVCAACG
GTRLSDAARAPLLRGISLADACRMTLGELVEWVAGVPASLPEEMQPMAERICEAFYDTAR
RLMELGLSYLTLDRAGATLSTGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPSNLEGLI
GVMNDLVADGNSVVLVDHDTQVLRHADHLIELGPAAGAGGGQIIAEGTAVMLCANPSSRI
GPFLTPKPTHHPTPAPPLFDLGTIRLVTRAIHTVQPLDVRIPKGRLTVVTGVSGSGKTTL
VLECLIPGLKASIEGKELPTQVAAVEAEGIRRVQLIDAAPIGANVRSTVATYCNVHDDLR
KVYARSEEAKTGGYKAGDFSYNTGRLRCPTCDGTGSISLDVQFLPDVDIPCPDCRGSRYA
RAAYSVHRTRKHAGAGRSLPELMAMSVDEALTDCDDLPVINSRLQVLHDLGLGYLTLGEA
TPGLSGGEAQRLKLASEMGRGQGDAVFVFDEPTIGLHPLDVQTLMKVFEHLTDQGATVIV
IEHDLDVIRRADYVMDMGPGGGYAGGRMVATGRPHDVASNPESITGRYI
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcataggacatccccccagcaaatcgagatccgaggtgcacacgcacataac
ctcaagcacatcgacgtggacataccactcaacaagatcgtaggcatcgccggcgtatca
ggttcaggcaaatcatcactcgcattgggcgtactttatgccgaaggatcgcgtcgctac
ttagaatcactctccacctacacccgcagacggatgacccaggccgcacgcgcacaagtc
gacgacgtgcgatacgtccccgccgcgctggccctccaccaacgccccgccgtgcccggc
atacgctccaccttcggcacatccacagagctgctcaacagcttgcggctaatgtattcg
agactctccagccaccgttgccccaacgggcattacctcccgccctcgatcaacgtagcc
gccgaacgcgagctgatctgccccgaatgcggcgcccacttctatgcccccggcgccgaa
gaactggccttcaacagccagggcgcctgccccacatgcgacggcacgggcctcgtaagc
catgtggatgaatctacgctcgtgcccgacgaatcgctcaccattgacgagggtgccgtg
gcaccgtggcagacactcatgttctcgcttatgaccgacgtctgccgcgcaatgggcgtg
cgcaccgacgtgcccttcaaagagctgacagacaaagaacgcgagatcgtctaccatggg
ccggccgtgaaaaagcacatcctgtataagtccaagacctccaacgtcgccggcgaaatg
gattttacctactacaacgccgtctatacggtggagaacgccttggccaaagtgacggac
gaaaagggcatgaagcgcgtggagaagttcctgcggcaagacgtctgtgcagcctgcggc
ggcacaaggctcagcgacgccgcccgggcacccctcctgcgaggcatctcactggccgac
gcctgccggatgacactcggagagttagtagagtgggtcgcaggcgtacccgcatccttg
cccgaagaaatgcaaccaatggctgaacgcatttgtgaggccttttatgacacggctcgc
cgactgatggagctgggcctctcttacctcaccctcgatcgagccggcgcgaccctctcc
acaggggaacggcaacgcgtgcaactggcgcgcgccgtacgcaatcgaaccaccggggtg
ctctacgtactcgacgaaccttccatcggcctacacccgtccaacctcgagggcctgatc
ggtgtaatgaacgacctcgtggcggatggcaattcagtagtgctcgtagaccatgacacc
caagtgctgcgtcatgccgaccacctcatcgagctggggcctgcggcgggcgcaggcggg
gggcaaatcatcgcagagggcacggcggtgatgctctgcgccaacccatcgtcacgcatc
gggcccttcctaacccccaaaccaacgcaccaccccacgccagccccacccctcttcgac
ctcggcaccattcgccttgtcacccgcgccatccacaccgtgcaacctttagatgtgcgc
atccccaaaggccggctcaccgtagtgacaggtgtatccggatcaggcaagacgaccctg
gtcttagagtgccttatccccggactcaaggcgtccatcgaggggaaagagctgcccacg
caggtagcagccgttgaggcagaagggatacgccgagtgcaactgatcgacgccgcaccc
atcggcgcaaatgtccgctccacagtagccacctattgcaatgtgcacgacgatctgcgc
aaagtctacgcccgcagcgaagaggctaaaaccggtggatacaaggccggggacttctcc
tacaatacaggccggctgcgttgccccacatgcgacggcacaggcagcatcagtctcgat
gtgcaattcctgcccgacgtcgacatcccttgccccgactgtcgcggatcgcgctacgcc
cgggcggcctactccgtccatcgcacaaggaagcatgcaggagccggtcgctccctcccc
gaactgatggccatgagcgtagatgaagccctgaccgactgcgacgatttgcccgtgatc
aacagccggctgcaagtgcttcacgacctcggtctgggctacctcacactgggcgaagcc
acaccgggactgtccggtggcgaagcgcaacgcctgaagttggccagtgagatgggccga
gggcagggcgatgcagtgtttgtcttcgacgagcctacgatcggcctacatccgcttgat
gtgcaaacgctcatgaaagtctttgagcacctgactgaccaaggagcaacggtcattgtt
atcgaacacgacttggatgtcattcgtcgagcggactacgttatggatatgggcccgggc
ggcggatatgccggcggacgcatggtggctacaggccgcccccatgacgtggccagtaat
ccggagagcatcaccgggcgatacatctaa
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