Tannerella serpentiformis: BCB71_11575
Help
Entry
BCB71_11575 CDS
T04474
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
toh
Tannerella serpentiformis
Pathway
toh02020
Two-component system
toh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
toh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BCB71_11575 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BCB71_11575 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
toh03021
]
BCB71_11575 (rpoN)
Transcription machinery [BR:
toh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BCB71_11575 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
Motif
Other DBs
NCBI-ProteinID:
AOH41701
LinkDB
All DBs
Position
complement(2836504..2837955)
Genome browser
AA seq
483 aa
AA seq
DB search
MQKQQLQQSLQQRLSPQQIQVVRMLELPALEMEERIKQELEENPALEEGRDPTESDDEPA
TDPDDEMTAEDSSLADLGDYLTDDDIPEYQLRAMSNAEERREEIPFAVGPSMHDHLEEQL
SLRSLTEREREIGRYIIGNIDDDGYLRRELSAVADDLMFKAGIEANEADVEAVLRIIQDF
EPAGVGARDLRECLLLQLKKKRPTPDTALALRILNEHFDAFTRKHYEKIRRALDLDEAAL
KTVLREITRLNPKPGNGWNEASDTAMNRITPDFIVDCHNGQLSLSMNQRDAPELHVNREY
ADMFRDYLGNKSNRSPEMRNAVQFVKQKLDAARWFIDAVRQRRETLQRTMEAILMLQTDF
FLTGDETKLRPMILKDVAEHAGYDISTVSRVSNSKYVQTNFGIYPLKFFFSEGVLNDQGE
EISTREIKKIMRETIDAEDKRNPVTDEALCALLRAKGYTPARRTVAKYREQLGIPVARLR
KEL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaacaacagttacagcaaagcctgcagcaacgcctctcaccgcagcaaatccag
gtggtccgtatgctcgagctgcccgccttggagatggaagagcgcatcaaacaggagctg
gaggagaaccccgccttagaggaaggacgcgacccgaccgaatcggacgacgaacccgct
accgacccggacgacgagatgacggcggaggacagctccctggccgatctgggcgactac
ctcacggacgacgacatccccgagtatcagctccgcgccatgagtaacgcggaggagcgg
cgcgaggagatcccctttgccgtcgggccctccatgcacgaccacctcgaagagcagctc
agcctgcgctcactcacggagcgcgaacgcgaaataggccgttacatcatcggtaacatc
gacgacgatggctacctgcgccgcgaactctcggccgtggccgacgacctgatgttcaag
gccggcatcgaggccaacgaggcggacgtggaggctgtcctacgcatcattcaggacttt
gagccggccggtgtcggtgcccgtgacctccgcgagtgcctcctcctgcaactgaaaaag
aagcgccccacgcccgacaccgccctggcgctgcgcatcctcaacgagcatttcgacgcc
ttcacccgcaagcattacgagaagatccgccgtgcgctggacctcgatgaggcggcgctc
aagaccgtcctgcgtgagatcacccgcctcaaccccaagcccggtaacggctggaacgag
gcctcagacacggccatgaaccgcatcacgccggacttcatcgtggactgccacaacggc
cagctcagcctcagcatgaatcagcgcgacgcccccgagctgcacgtgaaccgtgagtac
gccgacatgtttcgcgactatctcggcaacaagtccaaccgtagcccggaaatgcgcaac
gcggtgcagttcgtcaagcaaaagctcgacgccgcccgctggttcatcgacgccgtccgg
caacgtcgcgagacactccagcgcaccatggaggccatcctcatgctgcaaaccgacttc
tttctcaccggcgacgaaacgaagctccgccccatgatcctcaaggacgtggccgagcat
gcgggttacgacatctcgaccgtctcacgcgtcagcaacagcaagtatgtccagaccaac
ttcggcatctaccccctcaagttcttcttctccgagggcgtcctgaacgaccaaggcgag
gagatctccacccgcgagatcaagaagatcatgcgcgagacgatcgacgccgaagacaag
cgcaaccctgtgaccgacgaggccctctgcgccttgctccgagccaaaggctacacccct
gctcgccgcacggtggctaaataccgcgagcaactcggcattcctgtggctcgcctaagg
aaggagctgtga
DBGET
integrated database retrieval system