Tolypothrix sp. PCC 7601: HG267_16215
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Entry
HG267_16215 CDS
T11260
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
toi Tolypothrix sp. PCC 7601
Pathway
toi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
toi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG267_16215 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
toi03019
]
HG267_16215 (recQ)
03400 DNA repair and recombination proteins [BR:
toi03400
]
HG267_16215 (recQ)
Enzymes [BR:
toi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HG267_16215 (recQ)
Messenger RNA biogenesis [BR:
toi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HG267_16215 (recQ)
DNA repair and recombination proteins [BR:
toi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HG267_16215 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
UYD37130
LinkDB
All DBs
Position
complement(3902521..3904683)
Genome browser
AA seq
720 aa
AA seq
DB search
MLQYPNLEQALKYHFGYDRFRPGQRQIIEDALQNRDLMVVMPTGGGKSLCFQLPALLKKG
LTVVVSPLIALMQDQVEALRNNNISATFLNSSLNAYKVRSREEAILSGKVKLLYVAPERL
LSERFLPFLDLVNHQIGISTFAIDEAHCVSEWGHDFRPEYRQLRSLRQRYPNIPAVALTA
TATDRVRSDIIQQLGLKQPSIHIASFNRQNLYYEIRSKSKYAYAELLELIRDTQGSVIIY
CLTRKKVDELTFKLQNDKISAIPYHAGLTDDERTKNQTRFIRDDVRVIVATIAFGMGINK
PDVRLVVHFDLPRNIESYYQESGRAGRDGEPSRCTLFFNYGDIKTIEWSINQKTDPQEQL
IAKQQLRQMIDYAEGTDCRRTIQLGYFGERFAGNCGNCDNCRYPKPMQDWTIEAMKFLSC
VARCKERFGMLHIIDVLRGGKSQKILQNEHDKLSTYGIGKDRTVDEWRMLGRSLLHQGLL
EQTTDGYSVLKLNALSWEVMRRQRTVSLAVSAVQKVTWEETSEKAVEVELLMQRLRSLRK
QLADEQSVPPYVVFQDSTLKLMAQVQPTTLSEFAKLSGVGSHKLAQYGDKFLAEIRAYRQ
EQGVIDVVVNEKPAFGFRLPSTTELLTLQLHQRGLTVAKIAEQRNLRSSTVVGHLVDLVE
NNQPVDLNQLVPLEKQKKIWQVLEVLGDISLTPIREQLGENYTYDEIRLVRGRWRREKRK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagtatccgaatctcgaacaagcgctaaaatatcacttcggttatgaccgattt
cgtccgggacaacggcaaattatcgaggatgcgctgcaaaatcgggatttaatggtggtg
atgcctacgggtgggggaaaatctttgtgctttcagttaccagcgctgttaaagaagggt
ttgacggtggtggtgtctcctttgatcgctttgatgcaagaccaggtggaggcgttacgg
aataataatattagcgctacgttcctgaatagtagtttgaatgcttataaggtgcgatcg
cgggaggaagcaatcctcagtggtaaggtaaaattactttacgttgcaccagaacggctg
ttgagtgaaagatttctgccgtttctggatttagttaatcaccaaattgggatttctact
tttgcaattgatgaggcgcactgtgtctcggaatggggacatgatttccgtccagaatat
cggcaattgcgatcgctacgccaacgttaccctaatattcctgctgtcgccctgactgct
acagctaccgatcgcgtccgcagtgatattatccaacaactagggttaaagcaaccgagt
attcacattgccagttttaaccgccaaaatctttattatgaaatccgttctaaatctaaa
tatgcttacgcggaattattagaattaattcgggatacccaaggttcggtaattatttat
tgtttgactcgtaaaaaagttgatgaattaacttttaaattgcaaaacgataaaatttct
gccataccttatcatgcgggattaactgacgacgaacgcaccaaaaatcaaacgcggttt
attcgggatgatgtgcgggtaattgtcgccactattgcttttgggatgggaattaataag
ccggatgtgcgcttggtggttcactttgatttaccccgcaatatagaaagttactatcaa
gaatccgggagggcgggtagggatggcgaaccttcacgctgtacgctgttctttaattat
ggtgatattaaaactattgaatggagtattaatcaaaaaaccgatccgcaagaacagttg
attgccaaacaacaattgcggcaaatgatcgactatgccgaaggtacagattgcagacgc
acaattcaactaggttattttggcgaacgctttgcgggtaattgcggtaactgtgataat
tgccgttatcccaaaccgatgcaagattggacgattgaagcgatgaagttcttatcttgt
gtggcgcgttgtaaagaaagatttgggatgctgcatattattgatgtgctgcggggtgga
aaaagccagaaaattctgcaaaacgaacatgacaagctatctacctacggtatcggcaaa
gatagaactgtggatgaatggcgaatgctggggcgatcgcttttgcaccaaggtttactg
gaacaaaccaccgatggttactcggttttgaagctgaacgccttgagttgggaggtgatg
cggcgacaacgtaccgtcagtttagctgtgtcagcagtgcaaaaagtgacttgggaagaa
accagcgagaaagcagttgaagtagaattactcatgcagagattgcgatcgctgcggaaa
caactagctgatgaacaatctgtaccaccctacgttgtttttcaagattctaccttgaaa
ttaatggctcaggtgcaacctacaaccctcagcgaatttgccaaactttctggtgttggt
agtcataaactcgcccaatatggtgataaattcctggcagaaattcgcgcctatcgtcaa
gaacaaggtgtcatcgatgtagtggtgaatgaaaaacccgcttttggttttcgcttacct
tcaactacagaattattaacattacaattgcatcaacgcggtttaactgttgctaaaatt
gccgagcaaagaaatcttcgttctagtacagttgtaggacacctagtagatttagttgaa
aataatcagcctgtagacttaaatcaattagtgcctttagaaaagcaaaaaaagatttgg
caagtgttagaagtgctgggtgatatttctctcacccccattcgcgaacagctgggcgag
aattatacgtatgatgaaattcgcctagtgcggggaagatggcgcagggagaaaaggaag
taa
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