Tolypothrix sp. PCC 7601: HG267_23645
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Entry
HG267_23645 CDS
T11260
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
toi Tolypothrix sp. PCC 7601
Brite
KEGG Orthology (KO) [BR:
toi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
toi03021
]
HG267_23645
Transcription machinery [BR:
toi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HG267_23645
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_Mga
YdaS_toxin
MerR_1
SinI
DUF4143
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UYD32063
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Position
5760348..5761304
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AA seq
318 aa
AA seq
DB search
MKTAQTATDLVRTYLREIGRVPLLTHEEEIFYGKQVQRSTALYEIRDELVTQLGRQPTLE
EWAKATNLELAELNEVIADGEYAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGSIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKARTIRLPIHITEKLNKIKKAQRQLSQ
RLGRAPSASELAKELELTPKQVREYLEKARLPLSLDLRLGDNYDTELGEMLEDPGASPED
FVMQSSLSNDLERLMGDLTPQQKEVITLRFGLMDGQALTLARIGEILNISRERVRQIERE
ALTKLRKSKANMDEYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgctcagacagccacggacctcgtgcggacttacctgcgtgagattggccgt
gtgccactcttaacccacgaggaagagattttttatggcaaacaggtgcagcgttcaact
gctttgtatgaaataagggatgagcttgtcacccagttaggtcgtcaaccaactttagaa
gagtgggccaaagctacaaatctagaattggcagagttgaacgaagtgatcgccgacggc
gaatatgccaagcgcaagatggtagaagctaacttgcgattggttgtatctgttgccaaa
aaatatattaagcgcaatgtcgatctcctagatttaatccaagaaggcagcatcgggatg
caacggggtgtagaaaagtttgaccccacaaaaggttatagattttctacctatgcctat
tggtggatacgtcaagctatcaccagagcgatcgccgaaaaagctcgtactattcggttg
ccaatccacattacagagaaactgaataagattaaaaaagcacagaggcaattatcccaa
aggctgggacgcgctccttctgcatctgaattagctaaagaattggaattgacacctaaa
caggtacgagagtacctggaaaaggcccgtctacctctatccctggatttgcggttggga
gataattacgacactgaactgggagaaatgttggaagatcctggcgcttctccagaagac
tttgtgatgcaatcttcattgtctaatgatttagagcgcctgatgggggatctgactccc
cagcaaaaggaagtaatcaccctgcgctttggcttaatggatggtcaagctctaacttta
gccagaattggtgaaatcctcaacatcagtcgtgaacgagtacggcaaattgagcgggaa
gcactcactaaactacgtaagtctaaagccaacatggatgaatatttggccagctag
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