Tolypothrix sp. PCC 7601: HG267_24250
Help
Entry
HG267_24250 CDS
T11260
Name
(GenBank) DNA-directed RNA polymerase subunit beta''
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
toi Tolypothrix sp. PCC 7601
Pathway
toi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
toi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HG267_24250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
toi03021
]
HG267_24250
03400 DNA repair and recombination proteins [BR:
toi03400
]
HG267_24250
Enzymes [BR:
toi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HG267_24250
Transcription machinery [BR:
toi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HG267_24250
DNA repair and recombination proteins [BR:
toi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HG267_24250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Biotin_lipoyl_2
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
UYD32172
LinkDB
All DBs
Position
5909738..5913793
Genome browser
AA seq
1351 aa
AA seq
DB search
MTNEQAIFRNRVVDKGQLRNLISWSFVNYGTARTAVMADKLKDLGFRYATKAGVSISVDD
LMVPPSKRALLEAAEEEIRATEARYQRGEITEVERFQKVIDTWNGTSEALKDEVVVHFKK
TNPLNSVYMMAFSGARGNISQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTVTEYIIS
SYGARKGLVDTALRTADSGYLTRRLVDVSQDVIIREFDCGTTRGIPIRAMVEGGKTKIPL
ATRLHGRVVAEDVVDPKTKEVIAPRNTPVSDELAAKIQKSGVTEVLARSPLTCEAARSVC
QHCYGWSLAHAKMVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVAQQVRSKIDG
TVKIPRKLKVRAYRTRHGEDALYVEANGILILEPKKVGTDTPPPQEVHLTQGSTLYVFDG
NQVKQGQLLAEVALGGRTARANTEKAVKDVATDLAGEVQFAEVVPEQKTDRQGNTTTTAA
RGGLIWILSGEVYNLPPGAELVVKNGDAIASNGVLAETKLTTLHGGTVRLPEATPGKSTR
EIEIITASVVLDQATVTVQSSQGRNNYLVTTGNNQVFNLRATPGTKVQNGQVVAELIDDR
YRTTTGGFLKFAGVEVQKKGKAKLGYEVVQGGTLLWIPEETHEVNKDISLLLVEDGQFVE
AGTEVVKDIFCQNSGVIEVTQKNDILREVVIKPGELLMVDDPEAVIGRDNTFIQPGEEFQ
GTVATELRYIQYVESPEGPALLSRPVVEFAVPTNPDVPSTTSVSQQTGRSIQLRAVQRLP
YKDSERVKSVEGVELLRTQLVLEIEQEGEQDHNASPLAADIELIPDSDDADLQRLQLVIL
ESLVIRRDITADATQGSTQTSLEVQDGQTIAPGAVVASTQILCKEGGTVRGVQKGSENVR
RCLVLRDSVDKITINTNVQPNLKVGDLLVEGAEIAPGIFAPESGQVINIRNTAASSAAGE
SALSTKNYSVDIRIGRPYRVSPGAVLQIEDGDLVQRGDNLVLLVFERAKTGDIIQGLPRI
EELLEARKPKEACILCRRAGEVKVVYGDGDEAIAIKVVEPNGVVTDYPLGPGQNLVVTDG
SHVTAGQPLSDGPSNPHEILEVFFSLGSEDGVYACASHALQKVQTFLVNEVQLVYQSQGI
DIADKHIEVIVRQMTNKVRIDDGGDTTMLPGELVELRQVEQVNEAMAITGGARAQYTPVL
LGITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGYNAY
EETGAIDDYAALDSSSVLDEVDDPLDMVLDDRTARTYNLDAPSLTEPTFGATRRTERSIL
DDDDLIADEITDLVDDDDYEDDDDDDEDDYE
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgaacaggcaattttccgcaatcgcgtagttgataaaggccagctgagaaat
ttaatttcttggtcttttgtaaattacggtacagcgcgtaccgcagtcatggcggacaaa
ctgaaagacttaggatttcgctatgccaccaaagcaggggtatctatcagtgtcgatgat
ttgatggtgccaccttccaagcgggcgctgctagaagcagctgaagaagaaattcgcgct
actgaagctcgttaccaacgtggggaaattacggaagtagaacgctttcaaaaagtaatt
gatacctggaacggtaccagtgaagctctgaaagatgaggtagttgttcactttaaaaag
accaatcccctcaattccgtgtacatgatggcattctctggcgcacggggtaatatctcc
caagtccggcagctggtagggatgcggggattgatggcagatccccaaggggaaattatt
gacttacccatcaaaaccaacttccgtgaaggactcaccgttacggaatacattatttcg
tcttacggtgcccgcaaagggctggtagatacagccttacggacggctgactctggttat
ctgacccgtcgtctggtggacgtatcccaggatgtaattatccgggaatttgattgcggt
actaccagaggcattcccattcgggcaatggtagaaggtggcaaaacaaaaattcctcta
gctactcgcttacatgggcgggtagtggcggaagatgtggtagatcctaagacaaaagaa
gtgatagcaccaaggaataccccagtttccgatgaattggcagcaaaaattcaaaaatct
ggggtaactgaagtattggcgcgatcgcctctcacttgtgaagcggcacgttcagtttgt
caacattgctacggctggagtttagcccacgccaagatggtggacttgggtgaagctgtg
gggattattgccgcccaaagtattggggaacctggtacccagctaaccatgcggacattc
cacacaggtggggtgttcactggggaagtcgcacaacaagtacgttcaaaaattgatggt
actgtcaaaattcctcggaagctgaaggtaagagcatatcgtacccgtcacggtgaagat
gctctgtatgttgaggccaacggtatcctgattttggaaccgaaaaaagtcggcaccgac
accccgcctccccaagaagtacatctaactcaaggctcgacactttatgtatttgatggg
aaccaagtaaaacaagggcaattgctagcagaagttgcccttggtggacgtacagctcgt
gccaatactgaaaaagcggtaaaagacgtagcaacagacttggcaggggaagtacagttt
gcggaagttgtacccgaacaaaaaacagaccgccaaggcaacaccaccaccacagccgct
agaggtggtttgatttggattttgtctggggaagtctataacttaccacctggtgccgaa
ttagtagtgaaaaatggggatgcgatcgcttctaatggtgtattagcagaaaccaaactc
actaccttgcacggtggtacagtccgcttgccagaagctacccctggtaagagcactaga
gaaattgaaattattactgcttctgtcgtcttagaccaagctactgtcacagttcaaagc
tcccaaggtcgcaacaactacttagttactactggtaataaccaagtatttaacctcaga
gctacaccaggcacaaaagtgcagaatggtcaagtagtagcggaattaattgatgaccgc
tatcgcaccaccactgggggcttcctgaaattcgcgggtgtagaagttcagaaaaaaggt
aaagccaagctcggttatgaagtagtacagggtggtaccctgctgtggattcccgaagaa
acccacgaagtcaacaaagacatctccttgctgttggtggaagatggacagttcgtggaa
gctggcaccgaagtcgtgaaagatatcttctgccaaaacagtggtgtaattgaagttact
cagaaaaacgacatcttgcgggaagtcgtgattaagccaggtgaactgctgatggtagac
gatcccgaagcagtcatcggtcgagacaataccttcattcaacccggagaagaattccaa
ggtacagtagctaccgaattgcgctatatccagtatgtggagtctccagaaggcccagct
ttattgagccgccccgtagtggagtttgctgttcctaccaacccagatgtgccatccacc
acatctgttagccaacaaactgggcgttcaattcagttacgggcagtacaaagactacct
tacaaagattctgaacgtgtcaagtctgtagaaggcgtagaactgctgcgtacccaacta
gttttggaaatcgagcaagaaggcgaacaagaccacaatgcttctcccttagcagctgat
attgaattaatacccgattctgacgatgcagatctgcagcgcttgcagttagtaattttg
gaatctttggtgattcgtcgcgatattaccgctgacgctactcaaggtagtacccaaact
tcactagaagtacaggatggacaaaccatcgcccctggtgcagttgtcgccagtacccaa
atcttgtgtaaagaaggcggtacagtacggggtgtacagaaaggctcagaaaacgtccgc
cgttgtctagttttacgtgacagcgttgacaaaatcacaatcaatactaacgtccaaccc
aacctgaaggtaggagacttgttagtcgaaggtgcagaaatcgctcctggcatctttgct
cctgaatctgggcaagtcataaatatcaggaatacggccgctagttctgctgctggtgaa
tcagcactcagtactaaaaattactccgttgatatccgtatcggtcgtccctatcgagtc
agccctggtgctgtgttgcaaatcgaagacggcgatttggtacagcgtggtgataacttg
gtgttgctggtatttgaacgtgctaaaactggggacattatccaaggtttgccccggatt
gaagaactactagaagcccggaaacccaaagaagcttgtatcttatgccgtcgggctggt
gaagttaaggtagtttacggcgatggtgatgaagcgatcgcaattaaagtagtagaaccg
aatggagtagtcacagactatcctctcggccctggacaaaacttagtggtaacagatggt
tcccatgtaactgcaggacagcccctcagtgatggcccttctaacccccacgaaattttg
gaagttttctttagcctgggttccgaagatggagtctacgcttgcgctagccatgcttta
caaaaagtgcaaaccttcttggtgaacgaagtgcagttagtatatcaatcccaaggtatt
gatattgctgacaaacacatcgaagtgattgttcgccagatgaccaacaaagttcggatt
gatgatggtggtgacaccactatgcttcccggtgaattggtggaattgcgccaagttgag
caggtgaacgaagcaatggctattactggcggtgctagggcacagtatacccccgtatta
ttagggatcaccaaagcatccttgaacaccgacagctttatttctgctgcttctttccaa
gaaaccaccagagtcttaaccgaagctgccattgaaggtaaatctgactggctgcggggg
ttaaaagaaaacgtgatcatcggacgcttgattcctgctggtactggctacaatgcctat
gaagaaacaggagccattgatgattacgctgcactagatagcagcagcgtcttagatgaa
gtagacgatccgttagatatggtgctagatgatcgcacagctcgtacctacaatttagat
gctccgtctctgactgaacctacttttggtgctaccagacgtacagaacgctctattttg
gatgatgatgacttaatcgccgatgaaatcaccgaccttgtagatgatgatgactacgag
gatgatgatgacgatgatgaggacgattacgaataa
DBGET
integrated database retrieval system
