Tolypothrix sp. PCC 7601: HG267_32125
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Entry
HG267_32125 CDS
T11260
Symbol
sigC
Name
(GenBank) RNA polymerase sigma factor SigC
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
toi Tolypothrix sp. PCC 7601
Brite
KEGG Orthology (KO) [BR:
toi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
toi03021
]
HG267_32125 (sigC)
Transcription machinery [BR:
toi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HG267_32125 (sigC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_28
GerE
Motif
Other DBs
NCBI-ProteinID:
UYD33518
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Position
7939979..7941229
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AA seq
416 aa
AA seq
DB search
MPATSFYADAPYNAQKSQQILDQDLTVDDHELPLEDLQDLELASVDPASFAASTNRRSTD
LVRLYLQEIGRVRLLGRDEEVSEAQKVQRYLRMRIVLANAAKQGDAVIEPYLRLIEVQER
LASELGHRPSLERWAATAGIKLCDLKPTLSEGKRRWAEIAKITVEELEQIQSQGLQSKEH
MIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQG
ITRAIATSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLAVELEMTPTQVREVL
LRVPRSVSLETKVGKDKDTELGELLETDSVTPEELLMRESLQRDLQHLLADLTSRERDVI
LMRFGLADGHPYSLAEIGRALDLSRERVRQIESKALQKLRQPKRRNLIRDYLESLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaacatctttttacgcagatgccccctacaacgcacaaaaatctcagcaaatc
ttagaccaagatctcacggttgacgatcatgagttgcctttagaagatttgcaagattta
gagttggcttctgttgatcccgcgagtttcgctgctagcaccaaccgtcggagtacggat
ttagtacgcctctatcttcaagaaattggtcgggtacgcttattagggcgagacgaagag
gtttcagaagctcagaaagtccaacgttatttgcggatgcggatagtacttgctaatgct
gccaagcaaggggatgcagtcattgagccttatctgcgattgattgaagtccaagaacgt
ttagcatctgaactgggacatcgtccgtctttagaaagatgggcagccacagctggtata
aagttgtgcgatctcaagcctactttatctgaaggtaaacgtcgctgggcggaaattgcc
aaaattacagtggaagaattggaacaaattcagtcccaaggactccaatcgaaagaacac
atgatcaaggcgaatctgcgcttggttgtgtctgttgctaagaaatatcaaaatcgcgga
ttagaattattggatttagtccaagaaggcacacttggcttggaacgcgctgtagaaaaa
tttgacccaactaagggttatcgctttagtacttacgcttactggtggattcgtcaaggt
attaccagagcgatcgctacttctagccggacaattcgccttcctgttcacattactgaa
aagctgaacaaaattaaaaaggctcaacgcaaaattgctcaagaaaaaggtcggactccg
actttggaagatttggctgttgagctagaaatgacacccactcaagtgagagaagtattg
ttacgggttcctcgctctgtttctctagaaaccaaagtagggaaagataaagacactgag
ttaggcgaattgctcgaaactgatagtgttaccccagaagaattattaatgcgggaatct
ttgcaaagagatttacagcatttgttagcagatttaaccagccgcgaacgtgatgtaatt
ctgatgcggtttggtttagcagatggtcatccctactctttagccgaaatcggacgtgcg
ctggatttatcacgggaacgtgtacgccaaatcgaatctaaagctttgcaaaagctacgc
caaccaaagcgtcgtaatttgatccgcgactatctggaatccttgagttag
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