Entry |
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Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
tol Thalassolituus oleivorans MIL-1
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:tol00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TOL_0083
03410 Base excision repair
TOL_0083
03420 Nucleotide excision repair
TOL_0083
03440 Homologous recombination
TOL_0083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:tol03032]
TOL_0083
03400 DNA repair and recombination proteins [BR:tol03400]
TOL_0083
Enzymes [BR:tol01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TOL_0083
DNA replication proteins [BR:tol03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TOL_0083
DNA repair and recombination proteins [BR:tol03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TOL_0083
NER (nucleotide excision repair)
GGR (global genome repair) factors
TOL_0083
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
complement(90375..93167)
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AA seq |
930 aa
MSSNPVILVDGSSYLFRAFHAIPLLTNSKGVHTNAIKGVISMIKRLNKDYPESQVIVVFD
AKGKTFRNDIYSEYKAHRPPMPEELREQIQPIHDIIRAMGLPLLIIDGVEADDVIGTLAS
QAVQHQQDVVISTGDKDMAQLVNEHVALINTMTDTFMDIEGVKTKFGVPPEHIIDYLALM
GDKVDNIPGVPKVGEKTAVGLVAGLGSLEDIYANLDKVATLDFRGAKTLAPKLEEHKEQA
FLSKELATIKCDVELEFALPDFKNSDEHKEDLLALYRDLEFKAWIAELSSDPDLDVTTTN
AKSTASRASKGKPTEAAEVITDVMPDALEGQYEIILEQAALDAWIAQLKASSLFAFDTET
TSLNYKEAEIVGVSFAVEIGKAAYVPLAHDYDDAPQQLDRAAVLAQLKPLLEDKNQKKVG
QHIKYDAHVLANYGIQLQGVEFDTQLESYVLDSVGTKHDMDSLSLKYLGHKTITYEEVAG
KGAKQIGFNEVTIDVAGPYAAEDADITLRLHQVLWAKLQQQPSLAKVFTDIEMPVMPVLC
AMEEIGTIIDADMLHEQSQQIEQRLQQLEQEAHNLAGKVFNLGSPKQLGVILFEEQGLPV
LKKTPKGAPSTAEEVLAELAEDYELPRVITEHRGLAKLKNTYTDKLPMMVNAKTGRIHTS
YNQTIAATGRLSSTDPNLQNIPIRSEEGRRIRQAFIAAPGYKLVAADYSQIELRIMAHLS
GDEGLLSAFAEERDVHRATAAEVFGVNEAEVTDNQRRSAKAINFGLIYGMSAFGLAKQLG
IGRGEAQDYVNLYFQRYPGVKDYMDNTREQAKDQGYVETIYGRRLYLPDIKASNASRRQH
AERTAINAPMQGSAADIIKRAMIRVADWLPDSGFDARMLLQVHDELILEVRADQAEALAT
ELKTQMQCAAALKVPLLVEAGIGDNWEQAH |
NT seq |
2793 nt +upstreamnt +downstreamnt
atgtcatcaaaccccgtgattcttgtagatggatcgtcgtatttatttcgtgcgtttcac
gcgatccccctgctaaccaactccaaaggtgtacacaccaacgccattaaaggcgtgatc
agtatgatcaagcgcctaaataaggattatcccgagtcacaggttatcgtggtattcgat
gccaaaggcaaaaccttccgcaacgatatttacagcgaatacaaagcacatcgcccgcca
atgccagaagaactgcgcgaacaaatccagcccatccacgacattatccgtgccatgggc
ttgcccttgttgattatcgacggcgttgaagccgacgacgtgattggtacgctggcttcc
caagcggtgcaacatcagcaagatgtcgtgatctccaccggcgataaagacatggcgcaa
ttggttaatgagcacgtcgccctgatcaataccatgaccgatacctttatggatatcgaa
ggcgtaaaaacaaagttcggcgtgccgcccgaacacatcatcgactatctggcgctgatg
ggcgacaaagtcgataacatccccggcgtacccaaagtcggcgaaaagaccgccgtcggc
ttagtcgcgggtttgggcagcttagaggatatctacgccaatctcgataaggtcgcgacc
cttgatttccgtggtgcgaaaaccttagcgccgaagctggaagaacataaagagcaagct
tttctatcgaaggaactggccaccattaagtgcgatgttgaactcgaatttgcgctgccg
gatttcaaaaacagcgacgaacacaaagaagatctgctcgccctgtatcgtgatttagaa
ttcaaagcttggatcgccgaactcagcagtgatccagaccttgatgtcacgacaacaaat
gcaaaaagtacggcgagccgtgccagcaaaggcaaaccaaccgaagccgcagaggtcatt
accgatgtcatgccagacgcgcttgaaggccaatatgaaatcatccttgagcaagccgct
ttagatgcatggattgcccagctaaaagccagctcactgtttgcctttgataccgaaacc
acctcgcttaactataaagaagcggaaattgtcggcgtctcttttgccgttgagatcggc
aaagcggcatatgtgccactcgcccatgactacgacgacgcaccacaacaactcgatcgc
gctgcagtattggcacagttaaaaccgttactagaagataagaatcaaaagaaagtcggc
caacacataaagtacgacgctcatgtgctcgccaactatggcatccaattgcaaggtgtt
gagtttgatacgcaacttgagtcctatgtgttggattcggttggcaccaagcacgatatg
gacagcctctcactcaagtaccttggccataaaaccattacctatgaagaagtcgcaggt
aaaggcgccaaacagattggcttcaatgaagtcactattgatgtcgcaggaccctacgcc
gctgaagatgccgatatcactctacgcttacaccaagtgttgtgggcaaaactgcaacag
cagcctagtcttgccaaggtattcaccgacatcgaaatgcccgtcatgcccgtgctgtgc
gccatggaagaaatcggcaccatcattgatgccgatatgctgcacgagcaaagccagcaa
atagagcaacgcctgcaacagttagaacaagaagcccacaatttagccggtaaggttttc
aaccttggttcgcccaagcaactcggcgtgattttgtttgaggagcagggcttgccggtc
ttaaagaaaacgcccaaaggcgcaccatcaaccgccgaagaagtgctggcagaactggcc
gaagactacgaactgccgcgcgtcattaccgagcatcgtggtttagccaaattaaaaaat
acttacaccgacaaactgccgatgatggtgaatgcaaaaacaggccgcattcatacatcg
tacaaccagaccattgctgccaccggtcgtttgtcgtcgaccgatcccaatttgcagaac
attccgatccgttcagaagaaggtcgccgcatccgccaagcttttatcgccgcacccggt
tacaagctggtggctgccgactacagccaaatcgaactgcgcatcatggcgcatctgtcc
ggtgatgaaggcctccttagcgcttttgcagaagagcgtgacgttcaccgcgccacagca
gccgaagtatttggcgtcaatgaagcagaagtgaccgacaatcagcgtcgcagcgccaaa
gccattaactttggtttgatttatggcatgtctgccttcggtttagctaagcagttaggc
attggccgtggtgaagctcaagactatgtgaacctctacttccagcgctatcctggggta
aaagactacatggacaacacccgcgagcaagccaaagaccaaggttatgttgaaaccatt
tatggccgccgcctgtacttacctgacatcaaggccagtaacgcttcacgacgccaacat
gccgaacgcactgcaattaatgcccctatgcaaggcagtgccgccgacatcatcaagcgc
gccatgattcgtgtcgccgattggctgcccgacagtggctttgacgcgcgcatgctgctg
caagtgcacgatgaattgattttggaagtacgcgccgatcaagcggaagccctagcgacc
gagctgaaaacacaaatgcagtgtgccgccgcattaaaggtgccgttattagtagaagca
gggattggcgataactgggaacaggcgcactga |