Thalassolituus oleivorans MIL-1: TOL_0362
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Entry
TOL_0362 CDS
T02529
Name
(GenBank) predicted metal-dependent RNase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tol
Thalassolituus oleivorans MIL-1
Pathway
tol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOL_0362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tol03019
]
TOL_0362
Messenger RNA biogenesis [BR:
tol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TOL_0362
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
CCU70804
UniProt:
M5DZ56
LinkDB
All DBs
Position
387483..388865
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AA seq
460 aa
AA seq
DB search
MTPSASDLVFLPLGGTGEIGMNMNLYGHDGSWLMVDCGVTFPKPGRISADGTRHHSGEPD
TQMPDPEFIVARKDRLAGLVITHAHEDHVGAVPYLWHKLRCPIYCTRFTAEVLKKKLAEH
GLLHQVKIIVPETGERVHIGPFDVQFLALTHSIPDPNCLMIRTPVGNVFHTGDWKLDPDP
VVGHGYKKETFTQLAEEGVVAMVCDSTNATTSGHSASEGDLYDGLRHYIESAKGRVVVTC
FGSNIARLLTLSHVADDTGRYMGLYGRSMINMHQCAKRAGVWPFSAGSVDTGHLGYLPRH
EVLAVATGSQGEPHTALRRLAAGTHPDFELEAGDRVIFSARAIPGNEDAINGIIEQLKSM
GVDVITADEAELPIHASGHPAQEELETLYQWVQPEISIPVHGEEVHMKAHAGLAKGCGVP
QTMTGRNGDIFLLRPVPGIQRQKVRTGRLGWEKGKLVNVV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaccccttcagcatctgatcttgtattcctgcctcttggcggcaccggcgagatcggg
atgaatatgaacctttacggccacgatggtagttggctgatggtcgattgcggtgtcact
tttcctaagccggggcgtatcagcgccgatggtacacgtcatcactccggtgaacccgat
acgcaaatgcctgatcctgaatttattgtagcccgcaaagatcggctcgctggcttagtg
attactcacgcgcacgaagatcacgtcggggcggtgccgtatttgtggcacaagttacgg
tgcccaatttattgcacgcgctttaccgccgaagtactgaaaaagaaactcgcggaacat
ggtttgctgcatcaggtaaaaatcatcgtaccggaaaccggcgagcgcgttcatatcggc
ccctttgatgttcagtttttagcactgacacattcgattcctgatcctaattgtttaatg
attcgcacccctgtgggcaatgtatttcataccggcgattggaagttagatcctgatccg
gtggtgggtcatggctataaaaaagaaaccttcacgcaattggcggaagagggcgtggtg
gccatggtgtgtgactctactaatgccaccacttcgggtcattccgcgtctgagggcgat
ctctatgatggcctacgccattatatcgagagtgccaagggacgcgtggtggtcacttgt
ttcggtagcaacatcgcccggcttttaactttatcgcacgtggctgacgatactgggcgt
tatatggggttgtacggtcgttcgatgattaatatgcatcagtgcgctaagcgcgccggt
gtttggccgttcagtgccggctctgttgatactgggcatttaggttatttaccacgtcac
gaagtgcttgccgtggcaactggcagtcagggcgaacctcatacggccttgcgtcgattg
gcggcgggtacgcatcctgattttgaattagaagccggtgatcgggtgatcttcagtgct
cgtgctattcccggcaatgaagacgccatcaacggcattatcgagcagctgaaaagtatg
ggcgttgacgtgattaccgccgacgaagctgagctacccattcatgcctctgggcaccct
gcgcaagaagaactcgaaaccttataccaatgggtgcaaccagaaatctcgattccagta
catggcgaagaggtgcacatgaaagcgcacgcgggtttagcgaaaggctgcggcgtgccg
caaaccatgacgggccgtaatggtgatatctttctgctacgtcctgttccgggtattcaa
cggcaaaaagtcagaacaggacgtttaggttgggagaagggtaagttagttaacgtggtt
tag
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