Thalassolituus oleivorans MIL-1: TOL_0736
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Entry
TOL_0736 CDS
T02529
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tol
Thalassolituus oleivorans MIL-1
Pathway
tol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOL_0736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tol03019
]
TOL_0736
Enzymes [BR:
tol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TOL_0736
Messenger RNA biogenesis [BR:
tol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TOL_0736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
AAA_22
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
CCU71174
UniProt:
M5E0A1
LinkDB
All DBs
Position
777679..779079
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AA seq
466 aa
AA seq
DB search
MSEIQFADLGLSESLLKAVAEQGYTIPSPVQAQAIPAVLQGRDVMAAAQTGTGKTAGFTL
PILQRLDNGKRVSGNRIRALILTPTRELAAQIDENIKAYGKYLPLRSAVVFGGVKINPQM
IALRRGVDILVACPGRLLDLYQQNAVRFDEVEFMVLDEADRMLDMGFINDIKKILAKVPA
NRQNLMFSATFSAEIRALAKGLVNNPVEIDVSPRNSTAHNVEQWLVPVDKGSKSKALIEL
VSAGDWHQVLVFTRTKHGANRLTKQLEDAGITAAAIHGNKSQGARTRALADFKSNEIRVL
VATDIAARGLDIDQLPHVVNYELPNVSADYVHRIGRTGRAGASGEALSLVCAEELEDLEG
IEGLIGRTIERRELEGFAPQAPLPLSRPKAPRKPKKPKQSSGSSSAQGERSNSAPRNNSA
PRNNNAPKKPANGKPANRSGQSASKDGAAPSRPRRSQRGPRPSSAS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaatccaatttgccgatttaggtttatctgaatcgctgctgaaagccgttgcc
gaacaaggctacaccatcccatctccggtccaagctcaggccatacctgccgtattgcag
ggccgtgacgttatggccgcagcacaaacaggtaccggtaaaaccgctggttttacactg
ccaatattacaacgcctagataacggcaaacgggtatcgggtaaccgcatacgtgcctta
attctgacgccaacgcgcgaattagcggctcaaatcgacgaaaatatcaaagcttacggt
aaatacttaccgctacgttcggccgtcgtctttggtggcgtcaagatcaatccacagatg
attgctctgcgccgtggtgttgatattttggttgcctgcccggggcgtttgctcgacttg
tatcagcaaaatgccgttcgtttcgacgaagttgagttcatggtattagatgaagctgat
cgcatgctcgacatgggctttatcaacgacatcaagaagattctcgccaaagtacctgct
aaccgccagaacttaatgttctccgcaacgttttctgccgagattcgcgctctagcaaaa
ggcttagtgaataatcccgtggaaatcgatgtcagcccgcgcaatagcactgcacataat
gttgaacagtggttggtgccggttgataaaggcagtaaatcgaaagccttgattgaattg
gtgagtgcaggcgattggcatcaagtgttggtgtttactcgtactaagcatggcgcgaat
cgcttaactaaacagctcgaagatgctggcattacagccgcagcgattcacggcaataaa
agccaaggtgctcgtacccgcgcactggcagattttaagagtaacgaaattcgtgtgtta
gtggcgacggatattgccgcacgtggtttggatatcgaccaactaccgcatgtcgtgaac
tatgaactgccgaacgtttctgcagattatgtgcaccgtattggtcgtactggccgtgct
ggtgccagtggtgaagcattatccttggtgtgtgcagaagaattagaagatttagaaggt
attgaaggtttaattggtcgcacaatagaacgtcgcgaattagaaggcttcgcgccccag
gcgccgttacctttgtcgcgccctaaagcaccacgcaagcctaagaagccgaagcaatcc
tctgggtcgtcatcggcgcagggtgagcgtagtaatagcgcgccgcgtaataactctgct
ccacgtaataacaacgcgccgaaaaaaccagcgaatggcaaacctgccaatcgttctggc
cagtcggcgagcaaagatggcgctgcaccatctcgcccgcgccgctcgcagcgcggaccg
cgtcctagctctgccagctaa
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