Thalassolituus oleivorans MIL-1: TOL_1130
Help
Entry
TOL_1130 CDS
T02529
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tol
Thalassolituus oleivorans MIL-1
Brite
KEGG Orthology (KO) [BR:
tol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tol03032
]
TOL_1130 (topA)
03400 DNA repair and recombination proteins [BR:
tol03400
]
TOL_1130 (topA)
Enzymes [BR:
tol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TOL_1130 (topA)
DNA replication proteins [BR:
tol03032
]
Prokaryotic type
DNA Topoisomerases
TOL_1130 (topA)
DNA repair and recombination proteins [BR:
tol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TOL_1130 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_2
Zn_ribbon_recom
Toprim_4
DUF7351
Motif
Other DBs
NCBI-ProteinID:
CCU71564
UniProt:
M5E1Y2
LinkDB
All DBs
Position
complement(1204452..1207133)
Genome browser
AA seq
893 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNDFIVKSSVGHVRDLPTSGSASKSDPKERARQAALTRK
MSPDEKEIYKKKKAQDQLINRMGIDPEHGWKASYEILPGKEKVVEELKRLAKDADQIYLA
TDLDREGEAIAWHLREIIGEKDKQYRRVVFNEITKKAIQAAFEKPSELNMNRVNAQQARR
FLDRVVGFMVSPLLWAKVARGLSAGRVQSVAVRLIVEREREIRAFVPEEYWEAFADLNTN
SGEILRTQVARRANGEFRPSNETDTLSALELIRKGPFVVSKREDKPTSSKPAAPFITSTL
QQAASTRLGFSVKKTMTLAQRLYEAGFITYMRTDSTNLSQDAVASARDYIQQHFGDEYLP
EQPRIYSSKEGAQEAHEAIRPSDVTAKASVLASMEPDAQRLYDLIWRRFVACQTADARFT
STSVTVTSGEFELKTRGRIIRFDGHLKAMPSQGGKGEEDILLPDVSEGDVLHLDKLEPKQ
HFTKPSPRFSEAALVKELEKRGIGRPSTYASIISTIQERGYVSLKARRFYAEKMGDIVTS
RLVENFDGLMDFGFTANMEEKLDDIADGDVNWTSVLDEFYQGFRTQLDTASGENGMRLNA
PVDTDIDCPNCGRHMQIRTGSTGVFLGCSGYGLPPKERCTQTLNLIPGEEAITAEEDEEA
ESRRLMNKRRCKICDTAMDSYLLDENRKVHICGNNPDCNGFEVENGQFKIKGYDGPRLEC
DRCGSEMQLKSGRFGKYFGCTNNECNNTRKLLKNGEAAPPKMDPIPMPELRCLKVDDSYV
LRDGAAGLFLAASQFPKNRETRAPLVTELIPYQAQIPEKYHYLLDAPRTDSDGNPAIIRY
SRKTKEQYVMTEVEGKATGWSAYFDKGRWDITEKKAAAKPKAAAKKAPAKKKT
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatctctggtcatcgtggaatcgccagcaaaggctaaaacgattaataagtac
ctgggcaatgatttcattgtgaagtccagtgtcggtcacgtgcgcgacctgccaacatca
ggctctgctagcaagagcgatccgaaggagcgtgctcgtcaagcagcgcttactcgtaaa
atgtcgcctgatgaaaaagaaatttacaaaaagaaaaaggcacaagaccagcttattaac
cgcatgggcatcgatccagagcacggttggaaagcgtcttatgaaattcttcccggcaaa
gaaaaagtcgtggaagaactaaaacgcctcgcaaaagatgccgatcaaatctatctcgca
acggatttggaccgcgaaggggaagccatcgcttggcacctgcgggaaattattggcgaa
aaagacaagcaataccgtcgcgtggtattcaacgaaatcaccaaaaaagcgattcaagca
gcgtttgaaaaaccatcagagctgaacatgaatcgtgttaatgcccagcaagcacgtcga
ttcctcgatcgtgtcgtgggttttatggtgtcgccgctgctatgggcaaaggtcgcccgt
ggcctgtctgccggtcgcgtgcaatccgttgccgtacgtttgatcgttgaacgtgaacga
gaaattcgggccttcgtaccagaagaatactgggaagcgttcgccgatttaaataccaat
tccggcgaaattttgcgaactcaagtggcgcgtcgtgctaacggtgaatttcgtccaagt
aatgaaacagatacgcttagtgctttagagcttatccgtaaaggtccatttgtcgttagc
aaacgcgaagataagccgaccagctcaaaaccagcagcaccatttattacctctaccctg
cagcaggccgctagtacgcgcttaggcttcagcgttaagaaaactatgacgttggctcaa
cgtttgtacgaagccggttttattacctacatgcgtactgactctaccaatttgagccaa
gatgccgttgccagtgcacgtgattatattcagcagcacttcggtgatgaatacctgcca
gagcagccgcgtatttatagcagcaaagaaggtgctcaagaggctcacgaagccatacga
ccttctgatgtgacggcaaaagccagtgttttggcctcgatggagcctgatgcccagcgc
ctatacgatttaatttggcgtcgttttgttgcctgtcaaacggcagatgcacgctttacc
agcaccagcgttaccgtgacttctggcgagtttgaattaaaaactcgcggtcgcattatt
cgttttgacggccatctaaaagcgatgccatcacaaggtggtaaaggtgaagaagatata
ttgcttccggacgtatccgaaggtgatgttctgcacttagacaagctagaacctaagcaa
catttcactaaaccatctccgcgtttctcagaagcggcattggttaaagagctagaaaaa
cgcggtattggtcgcccttcgacctacgcctctattatttcaaccattcaagaacgcggc
tatgtcagcctaaaagcacgtcgtttttatgctgagaaaatgggcgatatcgttaccagt
cggctagttgaaaattttgatggcctaatggattttggttttaccgccaacatggaagaa
aaactggatgatatcgctgatggcgatgtgaactggacttctgtactcgatgagttttat
caaggtttccggacacagcttgataccgctagtggcgaaaatgggatgcgcctaaacgcc
cccgttgataccgatatcgactgccctaattgcggccgacatatgcaaattcgcaccggt
agcaccggcgtgtttttaggctgttccggctatggtttaccgccgaaagaacgctgtact
caaacgcttaatcttattccaggtgaagaagcaatcaccgctgaagaagatgaagaagcc
gaaagccgtcgtttaatgaacaagcgtcgttgcaaaatttgcgacacggcgatggacagc
tatttattggatgaaaaccgtaaagtacatatttgcggtaataaccccgactgtaacggt
tttgaagtcgaaaacggtcagttcaagattaaaggctatgatggtccgcgccttgaatgt
gatcgttgcggatctgaaatgcagttaaagtctggtcgttttggtaagtattttggctgc
accaacaacgaatgcaataacacgcgtaagttattaaaaaatggtgaagctgcaccacca
aaaatggatccaattccaatgccagagctacgctgtctgaaagttgatgatagttatgtt
ctgcgtgatggtgctgcaggcctatttttggcggctagccagttcccaaaaaatcgtgaa
acgcgcgctcctttggtcactgaattgattccataccaagcgcaaataccagaaaaatat
cactatttactcgatgctccgcgtactgatagcgacggtaaccctgcaattatccgctac
agtcgtaaaaccaaagagcagtacgtaatgactgaagtcgaaggtaaggcaactggttgg
agcgcttatttcgataaaggtcgctgggatattactgagaaaaaagcagcagcaaaacca
aaagcagctgcgaagaaagcaccagctaaaaagaagacttga
DBGET
integrated database retrieval system
