Thalassolituus oleivorans MIL-1: TOL_1472
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Entry
TOL_1472 CDS
T02529
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
tol
Thalassolituus oleivorans MIL-1
Pathway
tol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TOL_1472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tol03400
]
TOL_1472
Enzymes [BR:
tol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TOL_1472
DNA repair and recombination proteins [BR:
tol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TOL_1472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
SLFN-g3_helicase
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CCU71897
UniProt:
M5DRW0
LinkDB
All DBs
Position
1580631..1584422
Genome browser
AA seq
1263 aa
AA seq
DB search
MKRLNIDQFPLQGQSLIEASAGTGKTYTITQLYKRLLLAHRSDLPRLGTDQILVVTFTRA
ATEELRGRIREGIRETFEHVLSRQQAPLNAGEEATHELDRWLAEVAHSDSATLTSRELTK
WLQLNLSQMDEAAIYTIHGFCQRMLKQFAFDSAVVFDAELVLDAGDYLKQACEDVWRSSS
YPLGLDQSRFVCSQFSGPDKLFSLIRNWLSRPDFVFSPNIVKANTSFELEQEWVKAEALY
QRVAELWHSLGATDVTDLIAQSGVDKRSYSKKHLPNWLEQANDYLTSGFSLPATANLYRF
GQEELLEKTKKGEAPTHALFAAVDAFLPVANQLSLALQQSWYFSVKARYLELLERSGALT
PDDLLRLLDQALAGPQGQLLAAHIRAQYPVAMIDEFQDTDPLQYRIFSRIYPYQSADAKP
GYGLYMIGDPKQAIYGFRGADIFTYIQARRSLPDERRFTLDTNYRSHSGLVAAVNQLWQA
HAKPFIFDDDIKFMSVAASGRRDDGGLQLSAQNAASTVSTAQALPLLHLWQGGAGESRAA
ERARVAAECASQIQALLQGGGSFGESPDNKPVQASDIAVLVYSRKQAGRIRHELSRLGIG
SVFLTRDSVYDSQEARDVFSWLQAIAQPSDERAVRSALSTQTYGLSADRLDHLLNDERAW
EQQLSVMFKYHELWQKRGVMAAMMQWLEDDQRAVRLRSQDDGERCLTNLLHLGELLQQGS
RRLRGHQALIRWFGDQVFATERSGEEAQLRLESDANLVNIVTIHKSKGLEYPLVFLPYLW
EDSFIPFSQSEAHYVDDKQGLVINLAPDQKAKDAQIRDNTAENLRLLYVALTRARHACFI
WVSTADSKKKDVPQLAFSALGYLLQCDVSGDIADFNSEVIYQGPMPVWLGSDDFNISDTN
ATITANHFNGYSRDLWRVSSYSQLTAASHAHAAPTGVYALILEQTDQPTFDVEAESLRLA
SPYAIDDSTIDIQQANIPAALSFPKGATPGTCLHAILEVWDFVDAAKLHQLCLQQLQHFG
LDIELEPALAQWLQQVVTCPLVSEFESEFSLAQLKRDERLDEMEFHLPIAQLSSAEVNRL
LEERALQFDSLQGYLKGFIDLIFCRNGRYYVADYKSNHLGNSAENYQPESLRESMKDHNY
DLQAWIYTVALDQLLRVRLPNYSPEQHLGGTYYLYLRGMITEFTGEVFDDIVMPDVDAKK
QKAVNKSVNAMQGDLFGAEPSVPRSSASDGAEQAKANHAGVFYLPPDLTALAQWRKVLLG
VDA
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcctcaatattgatcaattcccactgcaaggccaatcgttaatcgaggccagt
gcgggcacgggtaaaacctacaccattacccaattgtataaacgtttactgttggcgcat
cgttcggatttgccacgcttaggcacagatcaaatattggtggtgacctttactcgtgcc
gccaccgaagagttacgcgggcgtattcgtgagggcattcgcgaaaccttcgagcacgtc
ttgtcgcgccagcaagcaccgttaaacgccggtgaagaagcgacccatgaattagatcgt
tggttagcggaagttgcgcattccgattctgcgacgctaacctcgcgcgaattaactaag
tggttacagcttaatttatcgcaaatggatgaagccgcgatttataccattcacggtttt
tgccagcgcatgctcaagcaattcgccttcgatagcgctgtggtgttcgatgccgagtta
gtactggatgctggcgattatttaaaacaagcctgcgaagatgtctggcgcagtagcagt
tatcccttagggttagatcaaagtcgctttgtttgctcgcagtttagcggccccgataaa
ttattcagcttgattcgcaattggttatcgcgccctgattttgttttctcgccgaatatt
gtcaaagccaatacgtcatttgagttggagcaagagtgggtcaaggccgaagccttatat
caacgcgtagctgaattgtggcatagccttggtgcaactgatgttactgatctcattgcg
caatcgggtgtggataagcgttcatacagtaaaaagcatttgccgaactggttagagcaa
gccaacgattatttaacctcaggttttagtttgccagcgacggcgaatctgtatcgcttt
ggccaagaagaactattggaaaaaaccaaaaaaggcgaagcgccaacccatgcgttattt
gctgcagtggatgcctttttaccggtggcgaatcaattaagcctagcgttgcagcaaagc
tggtatttttcggtaaaagcccgttatttagaattattagaacgctcaggggcattaacg
cccgacgacttattacgcttattagatcaagcccttgccggcccccaaggccagttattg
gccgcgcatattcgcgctcagtatccggtggctatgatcgacgagtttcaagataccgat
ccactgcaatatcgtatttttagccgtatttatccgtatcaatccgctgacgccaagccg
ggttatggcttgtatatgattggcgaccctaagcaggcgatttacggttttcgtggcgcg
gatatttttacctatattcaagcgcgccgcagcttaccggatgagcgccgttttacctta
gataccaactatcgcagtcacagtggtttagttgcagcggttaaccaattatggcaagcg
catgctaagccgtttattttcgacgacgacattaaatttatgtcggttgcagcgagtggt
cggcgcgatgatggcggtttacagctcagtgcgcaaaatgcggcaagcacagtaagtaca
gcacaagctctgcccttattgcatttatggcaaggcggtgcgggcgaatcaagggcggct
gagcgtgctcgtgtcgccgctgaatgtgccagccaaattcaggctttattgcagggcggc
ggttcgttcggtgagtcgcccgataacaagccagtgcaagccagtgatattgctgtgctg
gtgtattcgcgcaagcaagcggggcgtattcgccatgaattaagtcgcttagggattggt
agtgtctttttaacccgcgatagcgtttacgattcgcaggaggcacgcgatgttttctct
tggttacaagccattgcgcagccaagcgatgagcgcgccgtgcgttcggcactaagtact
caaacctatggtttgagtgcagatagactcgatcatttattaaatgatgaacgtgcttgg
gaacagcaattaagcgtgatgtttaaatatcacgagttatggcaaaagcgcggtgtgatg
gcagccatgatgcagtggctggaagatgatcagcgtgcggtgcgcttgcgcagccaagac
gatggtgagcgctgcttaaccaatttattgcacttaggtgaattgctacagcagggcagt
cgccgtttgcgcggccatcaggcattaattcgctggtttggtgatcaggtatttgccaca
gagcgcagcggtgaagaagcgcaattgcggttagaaagtgatgcaaacctagtgaatatt
gtcaccattcataaatctaaaggtttggaatatcccttagtgtttttgccctatctttgg
gaagacagttttatacccttctcgcaaagcgaagcgcattacgttgacgataaacaaggc
ttagtgattaatcttgcgcccgatcaaaaagccaaagatgcacaaattcgcgataacacc
gccgagaatttacgtttgctgtacgttgcgttaacccgtgcgcgtcatgcctgttttatt
tgggtcagtactgcggattcgaaaaagaaagatgttccgcaactggctttctccgcactc
ggttatttgttgcaatgtgatgttagtggtgacattgctgactttaatagcgaggttatt
tatcaagggccaatgcctgtgtggctgggcagtgacgattttaatatcagcgatacgaat
gccacgataactgcgaatcattttaacggttactctcgtgacttatggcgagtgagcagt
tacagccagttaacggcggcgagtcatgcccatgctgcgcccacgggggtgtatgcgttg
atattggagcagacggatcagccgactttcgacgtcgaagccgagagtcttcggctcgca
agtccgtacgcaattgatgactcaacgatagatatacaacaagcgaatattccagcggcg
ttgtccttccctaaaggggccacaccgggtacctgtttgcatgccatattggaagtttgg
gattttgtcgatgcggctaagttacaccaactctgcctacagcaattgcagcattttggt
ttagatatcgaacttgaaccagcgctagcgcagtggctgcaacaagtggtgacatgtcct
ctggtttcagaatttgaatccgaattttccttagctcagctgaagcgtgatgagcgtcta
gatgaaatggaattccatttaccgattgcacaactcagttcggcagaggtgaatcgcttg
cttgaagaacgcgccctacaatttgatagtttacaaggctatttaaaaggcttcattgat
ttgattttttgtcgaaatggacgttattacgtagctgactataaatcgaatcatttgggt
aattcggctgaaaattatcagccagagtcacttcgggaatcgatgaaagatcacaactac
gaccttcaggcatggatctatacagtggcgttggatcaactgttgcgggtgcgcttaccg
aattattcgccagagcagcatttaggtggcacctattatttgtatttacgtggcatgatt
actgagttcacgggtgaggtattcgatgacattgtgatgccagatgtcgatgcgaaaaaa
caaaaagcggtgaacaaatcggttaatgccatgcagggcgatttatttggcgcagagccg
agcgtgccaaggtcttcagcatctgatggagcagagcaagcgaaggctaatcacgctggt
gtgttttatttgccgccggatttaaccgcactggctcaatggcgcaaggtattattggga
gttgatgcataa
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