Thalassolituus oleivorans MIL-1: TOL_1473
Help
Entry
TOL_1473 CDS
T02529
Name
(GenBank) Exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tol
Thalassolituus oleivorans MIL-1
Pathway
tol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TOL_1473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tol03400
]
TOL_1473
Enzymes [BR:
tol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TOL_1473
DNA repair and recombination proteins [BR:
tol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TOL_1473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
Helicase_RecD
UvrD-helicase
AAA_22
RecD_N
SLFN-g3_helicase
PhoH
AAA_16
nSTAND3
AAA_28
UvrD_C
TrwB_AAD_bind
NTPase_1
AAA_29
Terminase_6N
AAA_5
FtsK_SpoIIIE
T2SSE
MukB
SRP54
AAA_7
AAA_18
ATPase
AAA
Motif
Other DBs
NCBI-ProteinID:
CCU71898
UniProt:
M5DQX0
LinkDB
All DBs
Position
1584422..1586359
Genome browser
AA seq
645 aa
AA seq
DB search
MQTQKLLLNTTLLNTEFSTLIDAMLSRGRLRSIDVQLAKQIVDYEFQRREERSQPLTQTE
ATTLFLAAAGVSLVLGRGQVCLPLARSPLPEWQNLWPKPVDLNVLLADCHVIAHIADQNI
DEKDYTGAEEQPPLTLFQGNLYLSRYYCYERGVFNHIQQRLNNALLVNDDELATAIRTLF
PSSDGGDTPVVDWQAVAATSACLQRFTVITGGPGTGKTTTVTRLLSALLSQNPNLSIALA
APTGKAAARMTESIRYARDRVANGERIPDESFTLHRLLGWSPRGFKYHQGRSLPYDCVVV
DEASMVDLPMMSHLFSALAADTRLILLGDQDQLASVEAGSVLADLCDAGTSHAPDIEFSQ
RLSRITGFDLTAVADRAYASMQNAVAHLRVSHRFNKDSGIGRLAAAVNTGNSDEAVTLFG
QYDDLAIAWHSAVEGRLRVLPWQQRVIAGYQDYCRAVREQASAAEILQCFNNFQVLVAVR
QGQFGVEETNRQIERLFKETGMLPASSSGSNSAWYPGRAVMITRNDYDLGLFNGDIGILV
SYEGEDRVAFIASDGAMRYLLPSRLPPHETAFAMTVHKSQGSEFEHVYLILPLEWQTVIS
RELIYTAITRAKVSFQCLTSLPCWQSGVATRVERASGLRQALWSN
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacacaaaaactcctgctaaatacgactctgctgaataccgagttttcgacttta
atcgacgctatgttaagtcggggtcgcttgcgcagtattgatgtgcaacttgccaagcag
attgtcgactacgaatttcaacgaagagaagagcgttctcagccgttaacacaaaccgag
gcgacgacattatttttggctgccgctggtgtgagtttggtattaggtagagggcaagtg
tgcttacctttggcgcgaagtccgttgcccgaatggcaaaacctttggccaaagccagtt
gatctcaacgtattgctggctgattgccacgttattgcccatattgccgatcagaatata
gatgaaaaggattacaccggcgcagaagaacagccgcccttaaccttgtttcaaggcaac
ttatatttgtcgcgttattattgctacgaacgtggagtgtttaatcatattcaacagcgc
ttaaataatgcacttttagttaacgatgacgaattagcgacggcaattcgaacattattt
ccatcatccgatggtggtgatacgccagtagttgattggcaggccgtggcagcaaccagt
gcctgcttgcagcgctttactgtgattaccggtggcccaggtacagggaagacgacaact
gtaacgcggctgttaagcgctttgttaagccagaatccgaatttaagtattgctttggct
gcgcccacaggaaaagcagcggcacgtatgacagaatcgattcgctatgctcgtgatcgt
gttgccaatggcgagcgaattcccgacgagagttttaccctgcatcgtttattgggttgg
tcgccgcgcggatttaaatatcatcaaggtcggtcgttaccctatgattgcgtggtggtc
gatgaagcctctatggtcgatttacccatgatgtcgcatttattttcagcattagctgcc
gatacgcggcttatattattgggcgatcaagaccagttagcctcggtggaggcgggcagt
gtgctggcggatttatgtgatgcgggcaccagtcatgcaccggatattgaattttcgcag
cgtctcagtcgcattactggatttgatttaacggcggtcgctgatcgagcatatgcgtcg
atgcagaatgccgtagcgcatttacgcgtgtcccatcgctttaataaagatagcggcatt
ggccgtttagcagcggcggtgaatacgggtaatagcgacgaggcggtgactctttttggg
caatatgatgatttagcgattgcttggcacagtgccgttgagggccggttacgcgtgtta
ccgtggcaacagcgcgtgattgctggatatcaagattattgtcgcgcagtaagagagcaa
gcatctgctgctgaaatattgcagtgctttaacaattttcaagtgctggtagcagtgcgc
caagggcaatttggcgttgaagaaactaatcgccagattgaacgtctgtttaaagagacg
ggtatgttaccggcgagttcttccggtagtaatagcgcgtggtatccggggcgggcggtg
atgattacccgtaacgattatgatctgggattatttaacggcgatatcgggattttagtt
tcttatgaaggagaagatcgcgtagcctttattgccagtgatggcgctatgcgttatcta
ctaccaagtcgtttaccaccacatgaaaccgcctttgccatgacagtgcacaaaagccaa
ggttcggagtttgagcatgtgtatttgatactgccgttagagtggcaaacggtgattagc
cgagagcttatttataccgccattacgcgggccaaagtctcttttcagtgtttaaccagt
ttgccgtgttggcagtcgggcgttgctacaagggtcgagcgggccagtggtttacggcaa
gctttgtggtctaattag
DBGET
integrated database retrieval system
