Thalassolituus oleivorans MIL-1: TOL_1567
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Entry
TOL_1567 CDS
T02529
Name
(GenBank) ATP-dependent RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
tol
Thalassolituus oleivorans MIL-1
Pathway
tol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOL_1567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tol03019
]
TOL_1567
Enzymes [BR:
tol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TOL_1567
Messenger RNA biogenesis [BR:
tol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TOL_1567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
UvrA_inter
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
CCU71992
UniProt:
M5DS63
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All DBs
Position
1688641..1690056
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AA seq
471 aa
AA seq
DB search
MLKKLLKAVSGKSKAPTNTPPKQQSKSTADTKKPAVAKTSTANKGSKPANTTAKTNGPQH
AAGREKHEHKRTKANAVVEAPWDISQFKVEPEEGKTRFHDLDLPDSVMQGIHKLGFTYCT
PIQAESLPAALRGRDTIGQAQTGTGKSAAFLLTILNRLLTNVPAERFASEPRALVIAPTR
ELVMQIGKDAEGLAKYTGLNVLTVVGGMDYEQQRKVLRDEVVDILVATPGRLIDFMRSQD
VFLDQIEVLVLDEADRMLDMGFIPDVRRIVRSTPPKDERQTLLYSATFNYDVRILIDQWT
KDPHQVVIEPEQVTTDRVVQKCYLVAESDKYRVLEQVLNEEKPERCIIFANRRDLTRNLC
DKLNKHGHVSVLLSGEVAQQKRVRTLERFRDGHVNILVATDVAGRGIHVDGVSHVINYTL
PEDPEDYVHRIGRTGRAGAMGVSISLVSEDDAFVLPDLEKYLGMKLELTQP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaaaaaactgttaaaagcagtttcgggaaagagtaaggcgccgaccaatacgcca
ccgaagcagcaatccaaaagcacggcagatactaaaaagccagccgtcgcgaagacatcc
actgccaataagggcagtaagccggctaacactacggcaaagacaaatggtccgcagcac
gctgcgggtcgcgaaaagcacgaacataagcgcactaaagcaaatgcggttgtcgaagcg
ccgtgggatatcagccaatttaaggttgaacctgaagaaggcaaaacgcgtttccacgac
ttagaccttccagattctgtgatgcagggcattcataaactcggcttcacttattgcacg
cctattcaggccgagagtttaccagcagccttgcgcggtcgggataccattggccaagca
caaacgggcacgggtaagtcggcagcgtttttgttaaccattttaaatcgcttgctcact
aatgtaccggcagagcgttttgccagtgaaccccgtgctttggtaattgcgccaacgcgt
gagctagtgatgcaaattggcaaagacgctgaaggtctggccaagtataccggcttgaat
gttctgaccgtcgttggcggtatggattacgagcagcaacgtaaggttttacgtgatgaa
gtcgtcgatattctggtggctacaccgggacgtttgattgactttatgcgcagccaagat
gtgttcctcgatcagattgaagtattggtgctagacgaagccgatcgcatgttagatatg
ggctttatccctgatgttcgtcgcatcgtgcgttcaacgccgcccaaagatgagcgtcaa
acgctgctgtattcagcaacgttcaactacgatgttcgtattttgatcgaccagtggacc
aaagatccgcatcaggtcgtgattgagcctgagcaagtaacgacagatcgcgtcgtgcag
aagtgctacttagtggcagagtctgataagtaccgtgtgcttgagcaggtgctaaacgaa
gaaaaaccagaacgttgcattatcttcgctaaccgtcgtgatttaactcgtaatctctgc
gacaaactaaataagcacggtcatgtgtctgtgttgttgtctggtgaagttgcgcagcaa
aaacgcgtgcgcacgctggaacgcttccgcgatgggcatgtgaatattttagtggcaacc
gatgttgctggtcgtggtattcacgttgatggcgttagccatgtgattaactacaccttg
ccagaagatcctgaagattatgttcaccgtattggtcgtactggccgtgcaggtgctatg
ggtgtatctattagcctagtatctgaagacgatgcatttgtgttgcctgatctagaaaag
tatttaggcatgaagctcgaacttactcagccatag
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