Thalassolituus oleivorans MIL-1: TOL_2256
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Entry
TOL_2256 CDS
T02529
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tol
Thalassolituus oleivorans MIL-1
Pathway
tol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TOL_2256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tol03400
]
TOL_2256
DNA repair and recombination proteins [BR:
tol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TOL_2256
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TOL_2256
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
HEM4
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
CCU72659
UniProt:
M5DT11
LinkDB
All DBs
Position
complement(2378928..2380964)
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AA seq
678 aa
AA seq
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MSKAFELKSKYSPAGDQPNAIKQLVGGINAGLLKQTLLGVTGSGKTFTMANVIAECQRPA
IIMAHNKTLAAQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIDKDASVNEHIE
QMRLSATKALLERRDAIIVATVSAIYGLGDPDSYLKMMLHMVRGDRVDQRTILRRLAELQ
YSRNDMDFHRGTYRVRGEVIDVFPAESDDEAIRIELFDDEVEQLSTFDPLTGAIRNRLAR
ATIYPKTHYVTPRQKILDAIDGIKVELDERLDYYRKENLLVEAQRLEQRTRYDIEMMQEL
GYCSGIENYSRYLSGREEGAPPPTLFDYIPKDALVFVDESHVTIPQIGGMYRGDRSRKET
LVQFGFRLPSALDNRPMRFEEWEAIVPQCIFVSATPGNYEKEHQDNVVEQVVRPTGLIDP
VIEIRPATGQVDDVLHELNERTAKGERVLITVLTKRMAEDLTDFLQEQHVRVRYLHSDID
TVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAIFDADKEGFLRSERSLIQTIGR
AARNLNGKAILYADRITDSMQKAIDETDRRREKQVEFNTKHGITPKGVMKSVEDILEATP
APGKKTHNRNGRSKQKVAENAADYNANDWQHLPAHKLGARVSEVEDQMFKAAKDLNFEEA
ARLRDLLHRMKEQMIANS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggcatttgagctgaaatccaaatattctcccgctggtgatcaaccaaacgcc
atcaaacagttggtagggggcataaacgcaggtctgttaaaacagacattgctaggggtc
acgggctccggcaagacatttaccatggcgaatgttattgctgagtgccaacggccagcc
attatcatggcgcacaataaaacattggcggcacagctgtatggcgagtttaaagaattc
ttccccaataacgcggttgagtacttcgtttcttattacgactactaccagcctgaagcc
tatgtgccgtcgtcagatacctttatcgataaagacgcctcagtaaacgaacacatagaa
cagatgcgtttgtcggccaccaaagccttattggaacggcgcgacgccattatcgtggct
accgtgtccgcaatttacggtttgggtgatcctgactcgtatttgaaaatgatgctgcac
atggtacgtggtgatcgtgttgatcaacgtacgatcttacgtcgtttggcagaactgcaa
tacagtcgcaacgatatggatttccatcgaggcacctaccgagtacgtggtgaagtgatt
gatgtattcccagcggaaagcgacgacgaagccatacgcattgaattattcgacgacgaa
gtagagcagctcagcaccttcgatcctctaacgggtgctatacgcaatcgtttggctcgt
gccacgatataccctaaaactcactatgtaacaccgcgtcagaaaattctcgacgccatc
gacggcattaaagttgagctggatgagcgcctagattactaccgcaaagaaaatctatta
gtcgaggctcagcgtttagaacagcgcacccgttacgacatcgaaatgatgcaagagctg
ggttactgctcgggtattgaaaactactcgcgttacttgtcaggtcgcgaagagggcgca
ccgccgccgaccttatttgattacattcccaaagacgcgcttgtctttgtcgacgaatcg
cacgtgaccattccacaaattggcggcatgtatcgcggtgaccgctcgcgtaaagagacc
cttgtacaatttggtttccgcttgccgtcagcgttagataaccgcccgatgcgctttgaa
gaatgggaagcgattgtgccgcagtgcatttttgtttctgcaacgcctggtaactacgaa
aaagaacaccaagataacgtcgttgaacaggtcgttcgcccaaccggcttgattgatcct
gtgattgaaattcgtccagcgacaggtcaggttgacgacgtactgcatgagctaaatgag
cgtaccgcaaaaggtgagcgggttcttataaccgtattaaccaaacgcatggcggaagat
ctcaccgacttcttgcaagagcaacatgtgcgcgtgcggtatttgcattcagatattgat
accgtcgaacgtgtggaaattattcgtgatttgcgcctcggcgaatttgatgtgttggtg
ggtattaacctattgcgagaaggtttggatattcccgaagtctctttagttgctattttc
gatgctgataaagaaggcttcttgcgttctgagcgctccttaatccagaccattggtcgt
gccgcccgtaaccttaacggtaaagcgattttatacgcggatcgtattaccgactcgatg
caaaaagccatcgacgaaaccgatcgccgtcgtgaaaaacaagtggaattcaacaccaaa
cacggcatcacaccgaaaggcgtcatgaagtcagtggaagatattcttgaagctacgcca
gcaccgggtaaaaagacccataaccgcaatggtcgcagtaaacagaaagtggccgaaaac
gcagccgactacaatgcaaatgactggcaacatttaccagctcataagctcggcgcacga
gtgagtgaagtggaagatcaaatgtttaaagctgcaaaagaccttaattttgaagaggct
gcgcgcttgcgagatctgctgcaccgtatgaaagagcaaatgattgcgaacagctaa
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