Thalassolituus oleivorans MIL-1: TOL_2450
Help
Entry
TOL_2450 CDS
T02529
Name
(GenBank) probable ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
tol
Thalassolituus oleivorans MIL-1
Brite
KEGG Orthology (KO) [BR:
tol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tol03009
]
TOL_2450
Enzymes [BR:
tol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TOL_2450
Ribosome biogenesis [BR:
tol03009
]
Prokaryotic type
rRNA helicases
TOL_2450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
SNF2-rel_dom
UBA_4
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-ProteinID:
CCU72852
UniProt:
M5DTU5
LinkDB
All DBs
Position
complement(2577329..2578708)
Genome browser
AA seq
459 aa
AA seq
DB search
MILRVTAVFADIEFNPRILSGLEKQNISEPTEVQAQMLPLAMAGKDLKVCAETGSGKTLA
YLLPIMEKLLQVEASDSATRALVLVPTRELARQVFKSAKQLTDFTTLNVGVLTGGEEFKY
QASMLRKNPEIIISTTGRLVDHIRRETVDLSDLEFLVLDEADRMLDMGFSEDMEIIVGKA
KKERQTFMLSATLRHEGVGRIARAMLNKPEEITTNTAQVQHAFIRQQRILADDNAHKDRL
VTWLLANETYDKAIIFVNKRMEVERLSEFLRRHRNGIAMLHGEMTQDERNYVMQSIREGK
RQILVATDVAARGLDVEGLDLVINYDLARKGDEYVHRIGRTGRAGKEGLAISLIAAHEWN
LKASIERYLEIQMESRQISELKAEYKGPKKVKASGKAAGPKKKPKGKVPAKAAGRKAPSD
KKKLGPRPSRPKTEETEAKKSNLMDNSGFAPIRRQKPQK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatcttaagagttaccgccgtgtttgccgatatcgaatttaacccccgtattctttct
ggccttgaaaagcagaacatttcagagccgacagaagtgcaagcacaaatgctgccgttg
gcaatggcaggaaaagatttaaaggtatgcgcggagaccggaagcggtaaaacgcttgct
tatctattacccattatggaaaagctactccaagttgaggcgagcgactctgcgacacgc
gctttagtgctagtgccaacacgcgagcttgctcgccaagtgttcaagtcggctaagcag
ttaacggatttcaccacgctcaatgtcggtgtgctgaccggtggtgaagagtttaagtat
caagcatcgatgctgcgtaagaacccggagatcattatctctaccacggggcgactagtg
gatcatattcgccgtgagactgtcgatctgagtgatcttgagtttttggtactagatgaa
gccgaccgtatgctcgatatgggcttctccgaagatatggagatcatcgtcggcaaggca
aagaaagaacgtcaaaccttcatgttatcagcgacactgcgtcatgaaggggtaggccgt
attgctcgcgctatgctcaataagccagaagaaatcacaacgaatactgctcaagttcag
catgcttttattcgtcagcagcgtattttggctgatgataacgcgcataaagatcgctta
gtaacttggctgctagctaatgaaacctacgacaaagcgattatcttcgttaacaagcgt
atggaagtagagcgcttatctgaattcttacgtcgtcatcgcaatggtattgccatgctg
cacggcgaaatgactcaagatgaacgtaattacgttatgcagtcgatacgtgaaggtaag
cgtcagatcttagtggcgaccgatgttgctgcgcgtggattagacgttgaaggtctcgat
ctggttattaactatgatcttgctcgtaaaggcgatgagtatgttcatcgaatcggtcgt
actggtcgtgcgggcaaagaaggtttggcgatcagtttgattgcggcgcatgagtggaat
ttaaaagcttctatcgagcgctatctcgagattcaaatggaatcgcgtcagatctctgaa
ctcaaagccgaatataaaggcccgaaaaaagttaaagcgtctggtaaggcggcaggtccg
aagaaaaagccaaaaggtaaagtgcccgcaaaagcagctggtcgtaaagcaccttcggac
aagaagaaactgggccctcgcccaagtcgcccgaaaactgaagaaacagaagcaaagaag
agcaatcttatggataactctggctttgctcctattcgtcgtcagaagcctcagaaataa
DBGET
integrated database retrieval system
