Thalassolituus oleivorans MIL-1: TOL_2657
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Entry
TOL_2657 CDS
T02529
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tol
Thalassolituus oleivorans MIL-1
Pathway
tol03420
Nucleotide excision repair
tol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TOL_2657
03430 Mismatch repair
TOL_2657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tol03400
]
TOL_2657
Enzymes [BR:
tol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TOL_2657
DNA repair and recombination proteins [BR:
tol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TOL_2657
MMR (mismatch excision repair)
Other MMR factors
TOL_2657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
Med9
AAA_30
AAA_12
Hemocyanin_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
CCU73055
UniProt:
M5E6H2
LinkDB
All DBs
Position
complement(2791671..2794019)
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AA seq
782 aa
AA seq
DB search
MSQHLPPQNVSNASGLTPQQQAVVAHVQGHARVVAVAGAGKTTTLAHFIQARVAQGVPLR
RILVLMYNKAAQVEFQAKLKHVMPNQPIPDIRTFHSLGLRLYQKLIERGALPAFQGKPLS
DGEMEPMVWRLLQQLADDETKQDILSQRKKWVEPALSFIDLVKSGFLPPADVFDSLDLPP
QCRIFIELFYQFEDWRKQNRRISFADMIYDPVMCFRAHPEIADIFAGHMQWILVDEYQDI
NDIQQNLLRVLHGGRGSVMVIGDPDQTIYEFRGSRPEFIVEQFDREMGDVTCYQLPHTFR
YGHRLSLMANHLIHHNNEREPVLCLSHVSTPNTRVQLHHARYEPALTLTLIQEEAKQRPL
EDIAVINRLWALCAPVELALLAAGIPYQLDNAQSVLERWELRIFWLLLEIASGEFNRRDY
AAREEAWLHVLTTPYPKIKRQVLEDLARHLAQVDNNLGEAMFRAIPDSLSQWQKQQLEAR
AQVLANAEVGKLSAYRLLKDYVDLTEFEQGIEDSAFSAQQIEDRLQTIRAFLRFIRELDK
SSEDTLAYLRELRQQRREQRQATGVLLTSIHKSKGREWPVVIIPGLNAHYYPYAPEGEFT
TAASEESERRLLYVAMTRAREQLHLLAPAPSAKPARDTTSRDWPSRFDREMAVERCLTLM
KTLEQGGGEIELNPQFGALADWVPQYLEHLSSSGMATSELKFTMAAPKPNTQRSSVRPPA
NGGVVDQKFPGKQGVTRVTHDSLGTGVLISQDDQYVKIRFDGEQGVRTLSRDVAADYLKF
HF
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcagcacctaccacctcaaaacgtctctaatgccagcggtttaacgccgcagcag
caggctgttgtggcccatgttcaaggccatgctcgggttgtggctgtcgctggagcgggc
aagacgacgacgttagctcactttattcaagctagagtcgcacagggtgtgccgctgcgg
cgtatcttagtgctgatgtataacaaggcggcgcaggttgagtttcaagccaagcttaag
cacgtcatgcccaatcagccgattcccgatatccgtacctttcattccctcgggttgcgc
ttgtatcaaaaattgatagagcgcggtgccttaccagcatttcagggtaagccgctatcc
gatggtgaaatggaacctatggtttggcggttgttgcagcaactggccgatgacgaaacc
aaacaagatattctgtcgcagcgtaaaaaatgggtagaaccagcgctcagtttcattgat
ttagtaaaatcgggtttcttgccgccagctgatgtcttcgatagcttagatttaccgccg
cagtgtcgtattttcatcgagctgttttatcaatttgaagactggcgtaaacagaaccgc
cgtattagttttgccgacatgatttacgacccggtgatgtgtttccgcgctcatcccgaa
atcgccgatatttttgccggtcatatgcagtggatcttagtggatgagtatcaagacatt
aacgatattcagcaaaacctattgcgcgtattacacggtggtcgtggctcggtcatggtg
atcggtgaccctgatcaaaccatttatgaattccgtggctctcgcccagagtttattgtt
gagcagtttgatcgcgaaatgggcgatgtaacttgctatcagttaccgcatacctttcgt
tatggtcatcgcttaagtttaatggcgaaccatttgattcatcacaacaatgaacgtgag
ccggtattgtgtttgtctcatgtttcaacgccaaatacgcgcgtgcaattgcatcatgcg
cgctacgagccggcgctgacgctaactcttattcaagaggaagccaagcagcgaccacta
gaagatattgccgttatcaatcgcttatgggccttatgtgcgccagtagaactagcttta
ctggcggccggtattccttatcagttagataatgctcagtcggtattagaacgctgggaa
ttacgtattttttggttattgttagaaattgcgtcaggcgaatttaatcgccgtgattat
gccgcgcgtgaagaagcctggttgcatgttctcaccacgccgtatccgaaaataaaacgt
caggtattggaagatttagcacgacatttagcgcaagtagataacaacttgggcgaggcc
atgtttcgcgctattcccgattcactcagccaatggcaaaaacagcaattagaggcgcgt
gcgcaggtattagccaatgccgaagtcggcaaattatcggcttatcgcttattaaaagat
tacgtcgatttaactgagtttgaacaaggtatcgaagatagcgcattttcggcacagcaa
attgaagatcgattacagaccattcgcgcatttttacgttttattcgtgaactggataaa
agcagtgaggacaccttggcgtatttacgtgaattacgccagcagcgtcgagaacagcgc
caagctactggagtgctacttacatcaatccataagagtaaggggcgtgaatggcccgtg
gtaattattccaggattaaatgcccactattacccctatgcgccggaaggcgagttcaca
acggccgctagtgaagaaagcgagcggcgattgttgtatgtggctatgactagagcgcga
gaacagctgcatttgctggcgccagcgccatccgcaaaacccgcacgtgataccacctcg
cgtgattggcctagtcgttttgatcgagaaatggccgtggaacgctgcttaaccttgatg
aaaacactagagcagggcggtggtgaaatcgaactgaacccgcaattcggtgcgcttgcg
gattgggtgccacaatacctagagcatttatcaagcagcggtatggcgacaagtgagctt
aaattcacgatggctgcgcctaagcctaatacccagcgttcctccgttcgtccgccggct
aatggtggcgttgtcgatcagaaatttcctggtaagcaaggggtgacgcgagtcactcac
gattcgttaggtacgggcgttttaatatctcaagacgatcaatatgtgaaaattcgcttc
gacggtgagcagggggtgcgcaccctaagtcgagatgtggcagctgattatttgaaattt
catttctaa
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