Thalassolituus oleivorans MIL-1: TOL_2711
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Entry
TOL_2711 CDS
T02529
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tol
Thalassolituus oleivorans MIL-1
Pathway
tol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOL_2711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tol03019
]
TOL_2711
03016 Transfer RNA biogenesis [BR:
tol03016
]
TOL_2711
Enzymes [BR:
tol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TOL_2711
Messenger RNA biogenesis [BR:
tol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TOL_2711
Transfer RNA biogenesis [BR:
tol03016
]
Prokaryotic type
tRNA degradation factors
TOL_2711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
S1_2
EFP
Motif
Other DBs
NCBI-ProteinID:
CCU73109
UniProt:
M5DUB1
LinkDB
All DBs
Position
complement(2852849..2854951)
Genome browser
AA seq
700 aa
AA seq
DB search
MSNKPVANIKTFEFGGQTVTLETGRIARQADGAVLASIGKTQVLAAVVAAKSTKPGQDFF
PLSVHYQEKMYAAGRIPGGYLKREARPSEKETLTSRLIDRPIRPLFPDGFMNEVQVILTV
MASEKDVDPDICAMIAASAALSISGVPFNGPIAGARVGFVEDQGYMLNPTYSQLEDSLLD
MVVAGTKDAVLMVESEADELTEDEMLGAVLFAHNAFQPAITAIAEWTAELNVQRWDWTAE
AKNIPLYDAVKAQTAAAISEAYTISDKMARYGKLDEIKKEAVAKLAAAEGEEGFSADEIA
DMIGELKYEIVRQRSVDGHPRIDGRDNDTVRGLTIETGVLNTTHGSALFTRGETQAIVTT
TLGSSRDAQMIDFLHGTKTDPFLFHYNFPSYSVGECGRMSPPGRREIGHGRLARRGIQAM
MPSHDEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAPVAGIAMGLIKEGEK
FAVLTDILGDEDHLGDMDFKVAGTDEGITALQMDIKIEGITEQIMEIALEKAKAARLTIL
EQMNAVIAEPRTELSANAPTMSAMRVPSDKIRDVIGKGGATIRDITEKTGASVDISDDGS
IKIFAADKASADAAIAMIQAITAEIEVGVTYEGKVSKIVDFGAFITVLPGKDGLLHISQI
SEDRVENVADFLTEGQMVKVHVMDVDPKGRVKLTMKGVEQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaacctgtcgcaaacattaaaacatttgaattcggcggtcagaccgtcacg
ctagaaactggtcgtatcgcccgtcaagcagatggcgcagtattggcaagcatcggtaag
acccaagtattagctgctgttgttgcagcaaaatcgaccaaacctggtcaagattttttc
cctctttctgttcactaccaagaaaaaatgtacgccgctggccgtattcctggtggttac
ctcaagcgtgaagcgcgtccatcagaaaaagaaactctgacttctcgtttgatcgaccgt
ccaattcgtccactgttcccagacggtttcatgaacgaagttcaggttatcctgactgtt
atggcctctgaaaaagacgttgatccagatatctgtgccatgattgctgcgtctgccgca
ctgtctatttctggtgtacctttcaatggtcctatcgctggtgcgcgtgttggcttcgtt
gaagatcaaggctacatgttgaacccaacatacagccagctagaagattcattgttagac
atggttgtagccggtactaaagacgccgtattgatggtggaatctgaagccgacgaactg
actgaagacgaaatgctaggcgcagtattgttcgctcataatgcattccagcctgccatt
acagcgattgctgagtggactgctgaattgaatgtacagcgttgggattggactgcagaa
gctaaaaacataccgttgtatgacgctgttaaagcgcaaactgctgctgcaatcagcgaa
gcctatactatctctgacaagatggcgcgttacggcaagctagatgaaattaagaaagaa
gccgttgctaaattagcagcagctgaaggcgaagaaggtttctctgcggatgaaatcgct
gacatgattggcgaattaaagtacgaaatcgtacgtcaacgtagcgttgatggtcaccca
cgtatcgacggtcgtgacaacgatactgttcgtggtttaaccatcgagaccggtgttctt
aacaccactcacggttctgctttgttcactcgtggtgaaactcaagcgatcgttacgacg
actcttggctcttcacgtgatgcgcagatgatcgacttcttgcatggcactaagacagat
ccattcttgttccactacaacttcccttcttactcagtgggtgagtgtggtcgtatgagc
cctccgggtcgtcgtgaaattggtcacggtcgtttggctcgtcgtggtattcaagccatg
atgccgtcacatgatgagttcccgtacaccattcgcgtggtatctgagatcactgagtcg
aacggttcgtcttcaatggcgtctgtttgtggtgcatctttggcgctgatggatgctggt
gttccaatcaaagcccctgttgctggtatcgctatgggtctgatcaaagaaggcgagaag
ttcgctgttcttaccgacatcttgggtgacgaagatcaccttggtgatatggactttaaa
gttgccggtacagatgaaggtatcactgcattgcagatggatatcaagattgaaggtatc
actgagcagattatggaaatcgctctagaaaaagcaaaagctgcgcgtttgaccatcctt
gagcaaatgaatgcggttattgctgagcctcgcacagaattgtctgccaacgcaccgacg
atgtcggcaatgcgtgtaccatcagacaaaatccgtgacgtgatcggtaaaggtggtgcg
actattcgtgatatcaccgagaaaaccggtgcatcagttgatatcagcgatgacggctct
attaaaatcttcgcagcggataaagctagcgcagacgccgctattgctatgatccaagcg
atcacggctgaaatcgaagtcggcgttacttacgaaggtaaagtaagcaagatcgttgat
ttcggtgctttcattaccgtacttcctggcaaagatggtttgctgcacatctctcagatc
agcgaagatcgcgtagagaacgtggctgacttcttaactgaaggccaaatggtaaaagtc
catgtaatggacgttgatccaaaaggtcgtgttaagttgaccatgaaaggtgttgaacaa
taa
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